Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0292 |
Symbol | vsrD |
ID | 1219095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 324173 |
End bp | 324805 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637236649 |
Product | response regulator transcription regulator protein |
Protein accession | NP_518413 |
Protein GI | 17545011 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCG TCCTGATTGC GGACGACCAT GAAATCGTCC GCGCCGGTCT TCGGCAGTTC CTGTCGGAAG AGCGGGACAT CGAAGTGGCG GGGGAGGCGG CCAGCGGGGA AGAGGTGATG GAGCAACTGC GCACCGGAAC CTTCGACGTG GTGGTTCTGG ACATCTCCAT GCCCGACCGC AACGGCATCG ACACGCTCAA GCTGGTACGG CAGCGTCACC CGGACCTGCC GGTGCTGATC CTGTCCACCT TTCCGGAAGA CCAGTACGCG ATCAACCTGA TCCGGGCCGG CGCCTCGGGC TACCTGACCA AGGAAAGCGC GCCGGACGAA CTCGTCAAGG CCATCCGCAC CGTCTCGCAA GGGCGCCGTT ACGTGAGCCC GACGGTCGCC GAACTGCTGA TCGGCGGGCT GGAGAAGCCG ACCGACCAGC CGCTGCACCA GACCCTGTCC AAGCGCGAAT TCCAGATCTT CTGCAAGCTG GCGCGTGGCC AGTCGGTCTC GATCATCGCC GAAGAGTTGT TCCTGAGCGT CAAGACGGTC AGCACGTACC GCACCCGCAT CCTGGAAAAG ATGGGCATGA AGTCGAACGC CGACCTGACG TATTACGCCA TCAAGAACGG ACTGGTGGAA TGA
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Protein sequence | MIRVLIADDH EIVRAGLRQF LSEERDIEVA GEAASGEEVM EQLRTGTFDV VVLDISMPDR NGIDTLKLVR QRHPDLPVLI LSTFPEDQYA INLIRAGASG YLTKESAPDE LVKAIRTVSQ GRRYVSPTVA ELLIGGLEKP TDQPLHQTLS KREFQIFCKL ARGQSVSIIA EELFLSVKTV STYRTRILEK MGMKSNADLT YYAIKNGLVE
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