| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0284 |
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| Symbol | |
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| ID | 1219087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 316671 |
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| End bp | 317471 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637236641 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_518405 |
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| Protein GI | 17545003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.600145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGA TCGTCTTCAT CACCGGCGCG TCGAGCGGCA TCGGCCAGGC GCTGGCCCGC
CAGTACGCCG CGCGCGGCGC CACGCTCGGG CTGGTCGCGC GCCGCGTCGA TGCCCTGCAC
GGCTTCGTGC AGACGCTGCC GGCGGGCATC GCTGTCCACT GCTATGCCGC GGACGTGCGC
GATGCCCGGT CGATGCACGA CGCCGCCTCG GCATTCATGG CCGTGGCCGG CGTGCCCGAC
GTGGTGATCG CCAATGCCGG CATCTCGGTG GGCACCGACC TGCGCGAGGC CGGCGACCTG
CCCGCCTTTG CCGCCGTGAT GGAAACCAAC TGGATGGGGG TGCTCCATAC CCTGCAGCCC
TTCGTCGGGC CCATGCTCGC GCGCGCCGAG CCCGGCCGGC CGGGCGGGAC GCTGGTGGGC
ATCGCCAGCG TGGCGGGCGT GCGGGGCCTA CCGGGCGCGG CGGCCTACAG CGCGTCCAAG
GCGGCGGTGA TCAAGCTGAT GGAGAGCCTG CGCGTGGAGT TCAGCCCGAA GCGGCGACCG
GGCCTGCGCG TGGTCACCCT TGCGCCCGGC TACATCCGCA CGCCGATGAC CGAGCACAAC
CCCTATCCGA TGCCCTTCCT GATGCCGGCG GACCGCTTTG CCGAGCGGGC CGTGCAGGCC
ATCGACCGCG GCGCGCACTT CAAGGTGCTG CCGTGGCAGA TGGGCGTGGT CGCCGGCCTG
CTCCACGTGC TGCCGCGCTG GCTGTACGAC TTCGCCTTCG CGCACGCGCC GCGCAAGCCC
CGCAACCCCG GAATCTCCTG A
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| Protein sequence | MSQIVFITGA SSGIGQALAR QYAARGATLG LVARRVDALH GFVQTLPAGI AVHCYAADVR
DARSMHDAAS AFMAVAGVPD VVIANAGISV GTDLREAGDL PAFAAVMETN WMGVLHTLQP
FVGPMLARAE PGRPGGTLVG IASVAGVRGL PGAAAYSASK AAVIKLMESL RVEFSPKRRP
GLRVVTLAPG YIRTPMTEHN PYPMPFLMPA DRFAERAVQA IDRGAHFKVL PWQMGVVAGL
LHVLPRWLYD FAFAHAPRKP RNPGIS
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