Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0281 |
Symbol | |
ID | 1219084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 314264 |
End bp | 315343 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236638 |
Product | hypothetical protein |
Protein accession | NP_518402 |
Protein GI | 17545000 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.18209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC TCGAACACCA ACTCGACTAT CCCCTGGGCG ACACGCTGCC CGCAGGCGGC ATCCGCCACC AGGTCGCGCC CGGCATCTAC TGGCTGCGCA TGCCGCTGCC GTTCGCGCTG GACCACATCA ACCTGTGGCT GCTGCGCGAT CGCCAGGACG GCCAGGACGG CTGGACCATC GTCGACTGCG GCATCAACCA CGAAGCCATC CGCGCGTACT GGGAAACCCT CTTCGCCGAC GGGCTCGACG GCCTGCCCGT GCTGCGCGTG CTGGTCACGC ACTGCCATCC CGACCACGTC GGCCTGTCGC GCTGGTTGTG CGAAGGCGGC GACCACCAAC GCTGGAACGT GCGCCTGTGG ATGAGCCTGG GCGATTACGC CTTCGCCCGC ATGCTGGTGG GCGGCACCGG CGCGTCCAAT GCCGGGGGCG AGTCCGCCGC GCGCCATTTC GCCCGCCACG GCCTGACCGA CGCCGAGGCC GTCGAGCGCA TCCGCAACCG CAAGGACTAC TACAGCACGC TGGTGCCGGG CGTGCCCGAG CAGTACCGCC GCATCATGGA CGGCCAGGTC ATCGCGATCG GCCCGCACCG CTGGCGTGTC ATCACCGGCT TCGGCCACGC GCCCGAGCAC GTCGCGCTCT ACAGCGAAGA TGCCGGCGTG CTGATCTCCG GCGACATGGT GCTGCCGCGC ATCTCCACCA ACGTCAGCGT GTTCGACATC GAGCCCGAGG CCGATCCGCT CACGCTGTAT CTCACCTCGC TCGACAAGTA CGAGGCGTTG CCGGAAGACG TGCTGATCCT GCCCTCGCAC GGGCGGCCGT TCCGCGGCCT GCACACGCGC ATCCGCCAGC TGCGCGACCA CCACGCCGAC CGCCTCGCCG ATACGCTGGC CGCGTGCCGG CGCGCGCCGA GCTCGGCACG CGACATCGTC GACGTCATCT TCAAGCGCCA GTTCGACGTG CACCAGATGA CCTTCGCGAT GGGCGAAGCG CTGGCCCACC TGCACGCGCT GTGGCACCGC GGCGAGGTGG TCCGCGCGCC GGGCGCCGAT GGCATCATCC GATTCCACGC ACCGGCCTGA
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Protein sequence | MNALEHQLDY PLGDTLPAGG IRHQVAPGIY WLRMPLPFAL DHINLWLLRD RQDGQDGWTI VDCGINHEAI RAYWETLFAD GLDGLPVLRV LVTHCHPDHV GLSRWLCEGG DHQRWNVRLW MSLGDYAFAR MLVGGTGASN AGGESAARHF ARHGLTDAEA VERIRNRKDY YSTLVPGVPE QYRRIMDGQV IAIGPHRWRV ITGFGHAPEH VALYSEDAGV LISGDMVLPR ISTNVSVFDI EPEADPLTLY LTSLDKYEAL PEDVLILPSH GRPFRGLHTR IRQLRDHHAD RLADTLAACR RAPSSARDIV DVIFKRQFDV HQMTFAMGEA LAHLHALWHR GEVVRAPGAD GIIRFHAPA
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