Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0277 |
Symbol | |
ID | 1219080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 309615 |
End bp | 310295 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637236634 |
Product | carbonic anhydrase protein |
Protein accession | NP_518398 |
Protein GI | 17544996 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.101994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACATC GCATCAAGGA ACTCTTCGAG AACAACCGCA AGTGGGTCGA GCGCGTCAAT GCCGAAGACC CGGCGTTCTT CTCCGGCCTG GCCAACCAGC AAAACCCCGA ATACCTGTGG ATCGGCTGCT CCGACTCGCG CGTGCCGGCC AACCAGATCA TCGGCCTGCC GCCGGGCGAA GTGTTCGTCC ATCGCAACAT CGCCAACGTG GTGGTGCACT CGGACCTGAA CTGCCTGTCG GTGCTGCAGT TCGCGGTGGA AGTGCTGAAG ATCCGGCACA TCACCGTGGT CGGGCACTAC GGCTGCTCGG GCGTGAAGGC CGCGCTGACC AACCAGCGCT TCGGGCTGGC GGACAACTGG ATCCGCCACG TGCGCGACGT CGCCGAGCAG CACGACACCT ACCTCGGCAC GGTGATCCGC GAGCAGGACC GGCACGACCG GCTGTGCGAG CTCAATGTCA TCCACCAGGT CAACAACGTG TGCCTGACCA CCGTCGTGCA GGACGCCTGG GAACGCGGGC AGCCGCTGAC CGTGCATGGC TGGATCTACG GCGTGAAGGA CGGGCTGCTG CGCAATCTGG GGATGGCGGT GAACTCCAAC GAAGAACTGC ATGGCCAGTT GGCGAGTGCC TGGTTGAATT ACGGGAAGAA GGGGAGTGTG CCTACGCCTG TGGGGTATTG A
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Protein sequence | MPHRIKELFE NNRKWVERVN AEDPAFFSGL ANQQNPEYLW IGCSDSRVPA NQIIGLPPGE VFVHRNIANV VVHSDLNCLS VLQFAVEVLK IRHITVVGHY GCSGVKAALT NQRFGLADNW IRHVRDVAEQ HDTYLGTVIR EQDRHDRLCE LNVIHQVNNV CLTTVVQDAW ERGQPLTVHG WIYGVKDGLL RNLGMAVNSN EELHGQLASA WLNYGKKGSV PTPVGY
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