Gene RSc0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0225 
Symbol 
ID1219028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp247459 
End bp248304 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID637236582 
Producthypothetical protein 
Protein accessionNP_518346 
Protein GI17544944 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACG CCGATCACCC GAACGTTTCG AACGCAATGT CTTTTCTCTA CGCCCATCCG 
GTTTCCGCCG GCATCCGCGC ACGGGTCCTG TCCGAACTCG CCGACATCGA GCGGCGGCAC
GATGTCCGGG TCCTGTTTGC CTGCGAGTCC GGCAGCCGGG GCTGGGGGTT TGCCTCGCCC
GACAGCGACT ACGACGTGCG CTTCGTCTAC GTGCATCGCC CGGCCTGGTA CCTGAGCGTC
GAGCCGCAGC GCGACGTGAT CGAGGTGCCG ATCAGCGATG AACTGGATGT GGGCGGCTGG
GAGCTGCGCA AGGCGCTGCA ACTGATGCAC CGCTCCAATC CGACGCTGCT GGAGTGGCTG
GCCTCGCCGA TCGTCTACCG GGAAGACCCG GCGGCGGTAC AGCGCATGCG CGCGCTGGCC
CCGACCTTCT TCTCGGAGCG CAGGGGGCGC TGGCACTACC TGTCGATGGC GGCCAAGACC
TTTCGCGACC ACCTGCAGGG CGAGACGATT CGCTTGAAGA AGTACTTCTA CGTCCTGCGC
CCGCTGCTGG CGGCCCAGTG GATCGACGCC GGGCGCGGCA TGCCGCCCAT GCGCTTCGCC
GATCTGGCGG ACGTCATGGT GGCGGACGCG CCGCTGCGCG AGGAAATCAA TCGGCTGCTG
GCCATCAAGA TGGCCTCTTC CGAGGCGGAA TACGGTGCCC GGTTTCCGCG CATCCACGCC
TTTGTCGAGC AGGCATTGGC CGCGCAGGCG CTGCCGGCGG ACTTCCGGCA AGGCGGCGGA
GACCCCGCGG CGCTGGATGC GTTCCTCTAT GCAACCGTGA TGGCGGCGGA CACCCATCCT
TCCTGA
 
Protein sequence
MPHADHPNVS NAMSFLYAHP VSAGIRARVL SELADIERRH DVRVLFACES GSRGWGFASP 
DSDYDVRFVY VHRPAWYLSV EPQRDVIEVP ISDELDVGGW ELRKALQLMH RSNPTLLEWL
ASPIVYREDP AAVQRMRALA PTFFSERRGR WHYLSMAAKT FRDHLQGETI RLKKYFYVLR
PLLAAQWIDA GRGMPPMRFA DLADVMVADA PLREEINRLL AIKMASSEAE YGARFPRIHA
FVEQALAAQA LPADFRQGGG DPAALDAFLY ATVMAADTHP S