| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0216 |
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| Symbol | |
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| ID | 1219019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 238633 |
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| End bp | 239862 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236573 |
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| Product | transport transmembrane protein |
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| Protein accession | NP_518337 |
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| Protein GI | 17544935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCA CCGCCTCGCC CCCGCAAGAC CGCAGTCTCT GGATGCTGGC CGTCCTGAGC
CTGCTGATGG CCTTCGCCTC CATCTCCACC GACCTGTACC TGCCGGCGAT GCCGGCCATG
CAGGCCACCC TCGGTGCGAG CGCCGGTGCG CTCGAATGGA CCATCTCGGG CTATCTGGTC
GGCTTCAGCC TGGGGCAACT GCTGTGGGGC CCGATCGGTG ACCGCACCGG CCGGCGGCTG
CCGATTGCGC TGGGCCTGCT GCTGTTCATC GGCGGCTCGG CCGGCTGTGC GCTGGCCGCC
AGTGCCCCGG CCCTCATCGC ATGGCGGGCG GTGCAGGCCG CGGGTGCTTG CGCCAGCGTA
GTGCTGGCGC GCGCCATGGT GCGCGATCTG TACGAGGGCG AGCGTGCCGC GCGCATGATG
TCCACGCTGA TGACGGTGAT GGCGATCGCG CCGCTGGTGG GGCCGAGCGC CGGCGGCCTG
ATCCTGAAGC TGTGGTCGTG GCGCGCGATT TTCTGGACGC TGGTGATCGT GGGGTTGGCC
ACGCTGGCGG CGGTCGGCAC GCTGCCCGAG ACCCTGCCGG CCCACCGCCG CAACGATGCG
CCGCTGCATC GCACGCTCGC GCGCTACGGC GTGCTGCTCC GGCATCCGCG GTTGCTGGGC
TACCTCGGCG TCGGCGGCTT CTTTTATGGC GGGATGTACG CCTATGTCGC CGGAACGCCG
TTCGCGTACA TCGATTACTA CCACGTCCCG GCCCAGCACT ATGGGCTGCT GTTCGGGCTC
GGGATCGTGG GCATCATGGC CACCAACCTG CTCAACGCGA ACCTCGTCGG GCGTTTCGGC
GGCGACCGCC TGATGCGTGC CGGCGCTGTT GCCGCCGCGC TGGCCGGCGC GGCTGTCGCG
CTGGCTGCCC GCATGGGCTG GGGCGGGTTG ATGGGCCTGG TGATTCCGCT TTTCGTGTTC
GTCTCCACCA CCGGCTTCAT CGTGGCCAAC GCGATGACCG GTGCCCTGGG CACCTTCCCG
CAGTTTGCCG GCTCGGTCTC CGCGCTGGTC GGCGCCACGC AGTACGGCAC CGGCATCCTC
GGCTCGGCCC TGGTCGGCGC GCTGGCCAAC GGCACGCCCG TCCCCATGGG GCTGGTGATT
GCGGCATGCG GGAGCGGAGG TGCGCTGGCC GCCGTCCTGC TCGTGCCGGC GCGCCGGCCG
ATGCCCGTGG CCCCAGCGGC GGCGGGCTGA
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| Protein sequence | MQPTASPPQD RSLWMLAVLS LLMAFASIST DLYLPAMPAM QATLGASAGA LEWTISGYLV
GFSLGQLLWG PIGDRTGRRL PIALGLLLFI GGSAGCALAA SAPALIAWRA VQAAGACASV
VLARAMVRDL YEGERAARMM STLMTVMAIA PLVGPSAGGL ILKLWSWRAI FWTLVIVGLA
TLAAVGTLPE TLPAHRRNDA PLHRTLARYG VLLRHPRLLG YLGVGGFFYG GMYAYVAGTP
FAYIDYYHVP AQHYGLLFGL GIVGIMATNL LNANLVGRFG GDRLMRAGAV AAALAGAAVA
LAARMGWGGL MGLVIPLFVF VSTTGFIVAN AMTGALGTFP QFAGSVSALV GATQYGTGIL
GSALVGALAN GTPVPMGLVI AACGSGGALA AVLLVPARRP MPVAPAAAG
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