Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0191 |
Symbol | |
ID | 1218994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 212253 |
End bp | 213629 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637236548 |
Product | transmembrane two component system sensor kinase transcription regulator protein |
Protein accession | NP_518312 |
Protein GI | 17544910 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0364977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTGT TCATCTCAGC CTTTTTGGTG GCGTTTGTGG CGGGGCAAGA CAGCCATTCC TCGAAGGCGT CGCGCAGGCG CCTGTTGCTA TCGCATTCCG CCCCGGCCGA GTTGGTGGCG GGCGGGCTGG CCATTCTGCT GCTGGCCGCA TCGGTCGCAT GGCTTGCTAT AGCGTTTCAG GCCAGGGATG CGCCCTTTGT ATTGCTGGCC CTGGCAAGTA TTGCCGCTGT CCTGGCTCTC GCCTTTTATT GGCTGCGGCT TCGCATGCTG CGCGCCGCTG TGGCGCGGGA CTTGACCGAC CTGGAGAAGA GCGAGGCTCG GCTGGCGGGC ATCATCCGCT CTTCCATGGA GGCGATCATT TCCGTGGACG ATGCCCAGCG CATCGTGCTG TTCAATCCTA TGGCGGAAAC CCTGTTCGGA TGCCCGGCCA ATCACGCCAT TGGCCGTCCG CTGTCCGACT TCATGCCGGA GCGGTTTCGC GGCGCGCACG AAGCACACGT GCGGCGCTTT GGGGTGACCG GCGTATCGGA GCGTCAGATG GGCAAGCAGC GCCCGCTCTT TGCTCTGCAC GCGGATGGCC GTGAATTTCC AATCGAAGCC TCCATCTCGC AAATCGAGGT GAACGGCGGC AAGCTCTTTA CCGTGATGCT GCGCGACACC ACCGAGCGTG TCCGGGCGGA AGCGGCGCTG CGGCGCTCGC AGGAGGAGCT GCAGCATTTG TCGGACAGCA TTCTGGCTTC GCGGGAGGAG GAGCGGCATC GCATCGCCCG CGAGCTGCAT GACGATCTGG GACAGCGCCT GAGCGCGCTC AAGATGGATA TCTCACTGCT GGCGGCGGAT CTCCAGGCCG AAGGCGGCGA CAGAACGCTG ATCGCCCAGA CGGAGGCCAT GCAGCGAGTG ATCGACGAGA CGATCTCGGC GGTGCGGCAA ATTTCCGCCG ACCTTCGTCC ACCGCTGCTC GACGAGTTGG AGCTGGTACC GGCCATCGAG TGGATCGCCA AAAATTTCCG CCAGCGCTTC GGCTTGATCG TCAACGTGCA CGCCCAGGAG ATGCCGATGC AGGAGCGAGC GGCAATTTCT GTCTTTCGGA TCGTGCAGGA AGCACTGAAC AACGTGGTGC GCCACGCCGA TGCCACCCGC GTTGAGATCG AGTTTGTGCG GCTGGACGAT ATGCTCGAGT TGTCGATCCA GGATAACGGC CGTGGTTGGA GCGGGGTACC ACCGGCCCCG GGCGAGCGCA AGCCGCTGGG GTTGCTTGGT ATTCGCGAGC GCGCGCGTCT GCTAGGCGGC CAGGCCACGA TCGCACACAC GCCTGACAGC GGCTTTCGCT TGAGCGTACG TTTTCCCGCT ACTCAAGAAG TGACTGAGGA GACCTGA
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Protein sequence | MFVFISAFLV AFVAGQDSHS SKASRRRLLL SHSAPAELVA GGLAILLLAA SVAWLAIAFQ ARDAPFVLLA LASIAAVLAL AFYWLRLRML RAAVARDLTD LEKSEARLAG IIRSSMEAII SVDDAQRIVL FNPMAETLFG CPANHAIGRP LSDFMPERFR GAHEAHVRRF GVTGVSERQM GKQRPLFALH ADGREFPIEA SISQIEVNGG KLFTVMLRDT TERVRAEAAL RRSQEELQHL SDSILASREE ERHRIARELH DDLGQRLSAL KMDISLLAAD LQAEGGDRTL IAQTEAMQRV IDETISAVRQ ISADLRPPLL DELELVPAIE WIAKNFRQRF GLIVNVHAQE MPMQERAAIS VFRIVQEALN NVVRHADATR VEIEFVRLDD MLELSIQDNG RGWSGVPPAP GERKPLGLLG IRERARLLGG QATIAHTPDS GFRLSVRFPA TQEVTEET
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