| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0171 |
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| Symbol | |
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| ID | 1218974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 192394 |
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| End bp | 193134 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236528 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_518292 |
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| Protein GI | 17544890 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.808724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA TCCTGATCGT TGGAGCCACC TCCGCCATCG CGATCGCCTG TGCGCGGCAA
TGGGCCGCCG AGGGCGCCCG CTTCTTTCTG GTGGCACGCA ACGGCGAGCG CCTCGAGCAG
GTCGCCGACG ACCTGAGCGC GCGCGGCGCG CAACTCGCCA GCCGCCACCA GCTCGACATC
ACCGACCTGG AGCGCCATGC GGCCATGTTC GAACAGTGCC TGGCCGCGCT GGGCACGATC
GACATCGTCC TGGTCGCCCC GGGAACATTG CCGGACCAGG CGGCCTGCCA GGCGGATCCG
GCGATCGCGG TGCGAGAGTT CAACACCAAC GCCACCGCCG TCATCGCCCT GCTGACGCGG
ATTGCCAATG CGCTCGAGGC CCAGCGCAGC GGCGCGCTGG CGGTCATTTC GTCGGTGGCG
GCGGATCGCG GCCGCCCCTC CAACTATCTG TACGGCAGCG CGAAGGCCGC CCTCTCGGCC
TTTTGCGAAG GACTGAACGC GCGCCTGTTC AAAGCCGGCG TGCACGTCCT GACGATCAAG
CCGGGCTTCG TCTCGACACC GATGACCGCC GGGCTGCCCT TGCCCGGCCC GCTGGTCGCG
TCCCCGGAGA AGGTGTCCCG CGACATCGTG CGCGCCATCG ACAAGCGCAA GGACACGCTG
TACACACCGT GGTTCTGGGC GATCATCATG CTGATCATCC GATCGGTGCC GAAGCCTGTT
TTCAAACGGA CATCGCTGTA A
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| Protein sequence | MKNILIVGAT SAIAIACARQ WAAEGARFFL VARNGERLEQ VADDLSARGA QLASRHQLDI
TDLERHAAMF EQCLAALGTI DIVLVAPGTL PDQAACQADP AIAVREFNTN ATAVIALLTR
IANALEAQRS GALAVISSVA ADRGRPSNYL YGSAKAALSA FCEGLNARLF KAGVHVLTIK
PGFVSTPMTA GLPLPGPLVA SPEKVSRDIV RAIDKRKDTL YTPWFWAIIM LIIRSVPKPV
FKRTSL
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