Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0139 |
Symbol | pyrE |
ID | 1218942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 161518 |
End bp | 162231 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236496 |
Product | orotate phosphoribosyltransferase |
Protein accession | NP_518260 |
Protein GI | 17544858 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGAC TTTTTGCAGA CCAGAGAAAA AAGATGAGCC AAAACAGCGA GTTGCGCCAA TCCTTCATCC GCTTCGCGGT GGAAGCCGGC GTACTGTCGT TCGGGGAATT CGTGACCAAG GCGGGGCGGA CGTCGCCCTA TTTCTTCAAC GCCGGCAAGT TCAGCGACGG CGCGCTGCTC GGCCAGGTCG CGCAATTCTA TGCGAAAACC CTGCTGGACT CGGGCGTGCA GTTCGACATG CTGTTCGGCC CCGCCTACAA GGGCATCACG CTCGCTTCGG CCACCGCCGT GGCGCTGGCC GGCATGGGCC GCAACGTAGG CTTCGCCTAC AACCGCAAGG AAGCCAAGGA CCACGGCGAA GGCGGCAGCC TGGTCGGCGC CAAGCTGCAG GGCCGCGTGG TGATCGTCGA TGACGTGATC TCCGCCGGCA CCTCGGTGCG CGAATCGGTG GAGCTGATCC GCAACGCGGG CGCCACCCCC GCCGCCGTGC TGATCCTGAT GGACCGCATG GAGCGCAGCG GCAACGCCGT CGACATCGGC GAACGCTCGG CGGTGCAGGA CGTGCAGGCG CAATACGGCA TGCCGGTGGT GTCGATTGCC AACCTGGATG ATCTGCTGGG GTATCTCGAC CATGCCGGCG ATCCGGCGCT GGCGGGTTAT CGTGCCAAGG CGGCGGCGTA TCGGGACAAG TACGGCGTCA GCGCTGTTGT TTGA
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Protein sequence | MAGLFADQRK KMSQNSELRQ SFIRFAVEAG VLSFGEFVTK AGRTSPYFFN AGKFSDGALL GQVAQFYAKT LLDSGVQFDM LFGPAYKGIT LASATAVALA GMGRNVGFAY NRKEAKDHGE GGSLVGAKLQ GRVVIVDDVI SAGTSVRESV ELIRNAGATP AAVLILMDRM ERSGNAVDIG ERSAVQDVQA QYGMPVVSIA NLDDLLGYLD HAGDPALAGY RAKAAAYRDK YGVSAVV
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