| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0100 |
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| Symbol | thiD |
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| ID | 1218903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 112778 |
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| End bp | 113683 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236457 |
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| Product | bifunctional hydroxy-phosphomethylpyrimidine kinase/hydroxy-methylpyrimidine kinase |
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| Protein accession | NP_518221 |
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| Protein GI | 17544819 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00687] pyridoxal kinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.504997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATCA CCGACCCGAC GCTCGCCATT GTCGCTCCCG CTTCGCACGT GCCGCGCGTG
CTCACCATTG CCGGCTCGGA CAGCGGCGGC GGCGCCGGCA TCCAGGCCGA CCTGAAGACC
TTCGCCGCGC TCGGCTGCTA CGGCATGTCG GCCATCACCG CCGTCACGGC GCAGAACACG
CTGGGCGTGG CGGCGGTCGA GTCGCTCACG CCGGACATCG TCGGCGCGCA GATCGATGCC
GTGGCACAGG ACATCGGTGT CGATGCCGCC AAGACCGGCA TGCTGGGCTC GCCGGCGGTG
GTCGAGGCGA TCGTCTCGGC GCTGGCGCGC CATCCGATCG CCGCGCTGGT GGTCGATCCC
GTGATGGTCA GCACCAGCGG CGCCCAGCTC GGCAGCGATG CCACCGCGCA GGCCATGGCG
AAATGGCTGT TTCCGCGTGC GCTTCTGATC ACACCAAACC TGCCCGAAGC GAGCGCGCTG
CTCGGCCGCG CGGTCCGCAC CGCCGACGAC ATGCTGCCCG CCGCGCGCGA TCTGCTGACA
CTGGGGTCGC GCGCCGTGCT GCTCAAGGGC GGCCACCTCG CCGATGTGGC CATCCCCGGC
GAGGACGGCG TGCTGCAGGA CGTGCTGGTC ACCGCCGACG GCATCGAGCG CATCTACACG
CACACCCAGA TCGACACGCC GCACACGCAC GGTACGGGTT GCACGCTGTC GGCGGCCATC
GCCGCGCACC TGGCGCGCGG CGAGCCGCTG GAGGCGGCGG TCGAGCTGTC GCTGGATTAC
CTGCTGCACG CCATCGGCGC CGGCCGGCAC CTGGCCCTGG GCCGTGGCGC CGGTCCGCTG
AATCACGGCT TTGCGCCGCG CCCGCTGGCC GCGCCACGCG CGGTGGACGT GGGCGACGCG
GACTGA
|
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| Protein sequence | MTITDPTLAI VAPASHVPRV LTIAGSDSGG GAGIQADLKT FAALGCYGMS AITAVTAQNT
LGVAAVESLT PDIVGAQIDA VAQDIGVDAA KTGMLGSPAV VEAIVSALAR HPIAALVVDP
VMVSTSGAQL GSDATAQAMA KWLFPRALLI TPNLPEASAL LGRAVRTADD MLPAARDLLT
LGSRAVLLKG GHLADVAIPG EDGVLQDVLV TADGIERIYT HTQIDTPHTH GTGCTLSAAI
AAHLARGEPL EAAVELSLDY LLHAIGAGRH LALGRGAGPL NHGFAPRPLA APRAVDVGDA
D
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