Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0090 |
Symbol | |
ID | 1218893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 104315 |
End bp | 104773 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637236447 |
Product | hypothetical protein |
Protein accession | NP_518211 |
Protein GI | 17544809 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCG CCCCCGACCC GCTGATCGCC TGGCTGCTGG ACGAACTGCA GCCGCTGGCC GCGCAGATCG GCGAGATCCG CGCGCGCCGG ATGTTCGGCG GGGCGGGGCT GTATCACGAC GACATCGTCT TCGCACTGGT GATCCGGGGC ACCTGCTACC TGCGCGTGGA CGATGCCACG CGTGCGCGCT TCGCTGCCGA GGGCGGCACC CCGTTCCAGT ACGAGCGCGA AGGCCGCACC ATCACCATGA CCGGCTACCT CAGCACGCCG GCCGATGCGC TCGACGGCGG CCAGCCGCTG CGCGACTGGG TCCGCCTGGC CATCGAAGCC GCGCGGCGCG CGGCGAACGC CAAAGCCGCC AGGCCGAAAC GCGCGCCGGC CAAGTCCGCC GCCGCCGGGC AGGCCGGTGC GCAGAAGAAG GCCCCCGCCA GGAAGACCAC GGCACGCGCC AAGCGCTGA
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Protein sequence | MATAPDPLIA WLLDELQPLA AQIGEIRARR MFGGAGLYHD DIVFALVIRG TCYLRVDDAT RARFAAEGGT PFQYEREGRT ITMTGYLSTP ADALDGGQPL RDWVRLAIEA ARRAANAKAA RPKRAPAKSA AAGQAGAQKK APARKTTARA KR
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