Gene RSc0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0083 
Symbol 
ID1218886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp96462 
End bp97307 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content74% 
IMG OID637236440 
Producthypothetical protein 
Protein accessionNP_518204 
Protein GI17544802 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.187348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC CGCTGTCCAT CGCCGTCGCG CCCAACGGTG CGCGCAAGAC CCACGCCGAC 
CATCCCGCGC TGCCGATCAC GCCGGACGAG CTGGCCGCCT GCGCCCGCCG GTGCGTCGAT
GCCGGCGCGG CGATGCTGCA TCTGCATGTG CGCCGCGCCG ACGGCACGCA CAGCCTGGAG
CCCGACGACT ACCGCCCGGC CATCGCCCGC GTGAAGCAGG CGGTGGGTGA TGCGCTGGTA
ATCCAGATCA CCACCGAGGC GGTCGGCATC TACGGCCCCG CGCAGCAGAT GGCGTCGGTG
CGCGCGCTGC GGCCGGAGGC GATTTCCGCT GCGCTGCGCG AACTGGTGCC GAATGACGTG
AATGCGGCCG CGCACGAGGC CGAGGCAGCG CGCTTCTTCG CCGAGCTGGC CGCGGCGCGC
ACGGCCATCC AGTACATCCT CTATTCCGAC GACGACGTGG TGCGCTACCG CGACCTGCGC
GCGCGCGGCG TGCTGCCCGA TGCGCCGCAC TGGGTGCTGT TCGTGCTCGG CCGCTACAGC
GCGGGGCAGC GCTCCGAGCC GGCCGACCTG CTGCCCTTCC TGCGCGCCTG GGCCGACGGC
GGCGACCTCA CTGCCGGCGT GCCGTGGGCC ATGTGCGCCT TCGGGCCGCG CGAGGCCGAT
TGCGCGCTGG CCGCCGCGCT GCTGGGCGGC CACGTTCGGC TCGGCTTCGA GAACAACATG
GCGTTGCCCG ACGGCAGCCC CGCGCCCGAC AACGCCGCGC TCGTGGCCCA CTTCCGCCGC
CATACCGATG CGCTGCACCG GCCGCTCGCC AGCGCGGCCG ACCTGCGCAC GTGGTTTGCC
CGCTAG
 
Protein sequence
MTLPLSIAVA PNGARKTHAD HPALPITPDE LAACARRCVD AGAAMLHLHV RRADGTHSLE 
PDDYRPAIAR VKQAVGDALV IQITTEAVGI YGPAQQMASV RALRPEAISA ALRELVPNDV
NAAAHEAEAA RFFAELAAAR TAIQYILYSD DDVVRYRDLR ARGVLPDAPH WVLFVLGRYS
AGQRSEPADL LPFLRAWADG GDLTAGVPWA MCAFGPREAD CALAAALLGG HVRLGFENNM
ALPDGSPAPD NAALVAHFRR HTDALHRPLA SAADLRTWFA R