Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0083 |
Symbol | |
ID | 1218886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 96462 |
End bp | 97307 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637236440 |
Product | hypothetical protein |
Protein accession | NP_518204 |
Protein GI | 17544802 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.187348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGC CGCTGTCCAT CGCCGTCGCG CCCAACGGTG CGCGCAAGAC CCACGCCGAC CATCCCGCGC TGCCGATCAC GCCGGACGAG CTGGCCGCCT GCGCCCGCCG GTGCGTCGAT GCCGGCGCGG CGATGCTGCA TCTGCATGTG CGCCGCGCCG ACGGCACGCA CAGCCTGGAG CCCGACGACT ACCGCCCGGC CATCGCCCGC GTGAAGCAGG CGGTGGGTGA TGCGCTGGTA ATCCAGATCA CCACCGAGGC GGTCGGCATC TACGGCCCCG CGCAGCAGAT GGCGTCGGTG CGCGCGCTGC GGCCGGAGGC GATTTCCGCT GCGCTGCGCG AACTGGTGCC GAATGACGTG AATGCGGCCG CGCACGAGGC CGAGGCAGCG CGCTTCTTCG CCGAGCTGGC CGCGGCGCGC ACGGCCATCC AGTACATCCT CTATTCCGAC GACGACGTGG TGCGCTACCG CGACCTGCGC GCGCGCGGCG TGCTGCCCGA TGCGCCGCAC TGGGTGCTGT TCGTGCTCGG CCGCTACAGC GCGGGGCAGC GCTCCGAGCC GGCCGACCTG CTGCCCTTCC TGCGCGCCTG GGCCGACGGC GGCGACCTCA CTGCCGGCGT GCCGTGGGCC ATGTGCGCCT TCGGGCCGCG CGAGGCCGAT TGCGCGCTGG CCGCCGCGCT GCTGGGCGGC CACGTTCGGC TCGGCTTCGA GAACAACATG GCGTTGCCCG ACGGCAGCCC CGCGCCCGAC AACGCCGCGC TCGTGGCCCA CTTCCGCCGC CATACCGATG CGCTGCACCG GCCGCTCGCC AGCGCGGCCG ACCTGCGCAC GTGGTTTGCC CGCTAG
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Protein sequence | MTLPLSIAVA PNGARKTHAD HPALPITPDE LAACARRCVD AGAAMLHLHV RRADGTHSLE PDDYRPAIAR VKQAVGDALV IQITTEAVGI YGPAQQMASV RALRPEAISA ALRELVPNDV NAAAHEAEAA RFFAELAAAR TAIQYILYSD DDVVRYRDLR ARGVLPDAPH WVLFVLGRYS AGQRSEPADL LPFLRAWADG GDLTAGVPWA MCAFGPREAD CALAAALLGG HVRLGFENNM ALPDGSPAPD NAALVAHFRR HTDALHRPLA SAADLRTWFA R
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