Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0076 |
Symbol | |
ID | 1218878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 86708 |
End bp | 87478 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637236432 |
Product | proline rich signal peptide protein |
Protein accession | NP_518197 |
Protein GI | 17544795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0426414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCGGT TCCGGCAAGT TCTGCATCGG CTGGTCGTGC TGGGCATGCT GTGCCTGTGG TGGCCGGCCG CGGCGCCGGC GCAGACCATC GAAGTCGGGC GCACGCAGCT GGAATACGCC GACGGGGGCT GGAACCTCTC CGCCGATTTC GATTTCGATC TGCCGGGCAA CCTCGAAGAT GCCGTCAACA AGGGCATCGC GCTGTATTTC CTCGTCGAGT TCGAACTGAT CCGTCCGCGC TGGTACTGGT TCGACGACCA CGCCGTCAGC GCGACCCGTG TGGTGCGGCT GTCGTACCAC CCGCTCACGC GCCAGTACCG GGTCTCGACC GGTGGTCTGC AGGTGCCGTT CTCGCGGCTG AAGGACGCGG TCGACTTCAT GCAGCACGTG CGGGGCTGGC GCGTGTTCGA GCAGCGCGCG GTCAAGGCCG GCGAGGCGGT GCAGGCCGAA GTCCGCATGC GCCTGGATGT GTCCCAACTG CCCAAGCCGT TCCAGATCAA CGCCGTCAAC ACGCGCGACT GGAATCTCGG CTCCGACTGG AAGCGCTTTT CGTTCGTGGT GCCCAACGAA CCGGTGCCGC CCGCACAGCC GCCCGCGCCG CCCGCGCCGC CGGCGCAGTT GCCCACGAGC GCGCCGCCTG CTGGTCCGGC GCCGAACCCG GCCCCCTCTC CCGCGTCCGG CACGCTGGGC CTGTCGCCCA ATCCGGGCTG GGGCATGGGC GCGGGGTCGG GCAACAATGC GGCATCGCTG CTGCTGGCCC CAGCCAAATG A
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Protein sequence | MPRFRQVLHR LVVLGMLCLW WPAAAPAQTI EVGRTQLEYA DGGWNLSADF DFDLPGNLED AVNKGIALYF LVEFELIRPR WYWFDDHAVS ATRVVRLSYH PLTRQYRVST GGLQVPFSRL KDAVDFMQHV RGWRVFEQRA VKAGEAVQAE VRMRLDVSQL PKPFQINAVN TRDWNLGSDW KRFSFVVPNE PVPPAQPPAP PAPPAQLPTS APPAGPAPNP APSPASGTLG LSPNPGWGMG AGSGNNAASL LLAPAK
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