Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0064 |
Symbol | |
ID | 1218866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 70887 |
End bp | 72692 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236420 |
Product | putative long-chain-fatty-acid--CoA ligase protein |
Protein accession | NP_518185 |
Protein GI | 17544783 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.846144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGATG GATACCATCG AAGCCCACCG TCACGAGCGC CCCGTATCGA GGGCTGCCAG CACACAGCCG GCGCGTCGCC CAGCGGCGAC ACCGGACCGA GGAGACACGC CATGACCGCC CATAACCGCG AACCGGTCGA GTATCTCGCG GGCGAGATGC CGCTGCACCG CTATTGCGCG CATCACGCCG CGCAGACCCC CGAGCGTATC GCCCTGCTGT GGTACGGCCG TACGATCTGC TGGCGCGAGC TCGATCAGCT GTCGACGCGG CTGGCCGTGC AGTTCCAGCG GCTCGGCGTG GCGCGTGGGC ATCGTGTCGC CCTGTTCCTG CAGAACTGTC CGCAGGCCAT CCTGGCGCAT CTGGCCGCCG CCAAGCTGGG CGCCATCGCG GTGCCATGCC TGCCGCTGTC GCGCCAGCAT GAACTGCACG ACCAGTTGGC CGATTGCGGC GCCAAGGTCC TGGTTGCCGC GGCCGACCTG ATGCCCATCG TCGAAGCCGC GCGGCCGGGC ACCTCGGTCG ACGCCGTCAT CACCACGCGC TATGCCGACC TGCAGCCGGC GCAGCCCGCC TGCCGCAAGG CGCTGGCGGT GCCGCCCGAG CTGATCGCCG CCGATATCGC GTCCGCCCCG GTGGGCCGGG GCCAAGCCGG CAGCAGCGGT CAGTTCGACC TCATGCGGCT GCTGGGCGAG CCGGTGGACG TGGCCGAGCG CAATGCCGTC ACCGCGATCC AGGTCGACCT GGACGAGGTG GCGCTGATGG TCTACACGTC CGGCATCACC GGGCGCCCCA AGGGGGCCAT GCTCACCCAC CGCAACGCGC TGTACAAGAC CGCCGTGACC GTGCAGACGA GCGGCATCCA GGCCGCCGAC GTACTGCTGG CGGCGGCGCC GCTGTCGCAC ATCGCCGGCA TGCTGATGGG CATGAACCTG ATGCTGTACG CGGGCGCGCC GACCATCCTG CTGTATCGCT TCGACCCGCT GGCCGTGCTG CAGGCGATCG ACCGCTATCG CGTCACCTGG TGGTACAGCA TGACGCCGAT GAATCTGGCG GTGATGGCGC ATCCCGAAGC CGGGCAGTAC CGCATGGCCT CGCTGATCGG CAACCCGTGT ACCAGTTTCG GCGCGCCGCT GACCGAGGCG ATCGCCGATC GATGGCGCGC CTTCGCGGGG CCGCAATGCC GCATCTATGA AGCGGCCTAC GGCCTATCGG AAACGCATAC CTGCGACGCC GTCATGCCGC CCGATGCCCC CCGCTGGGGC TGGCACGGCA AGATCGTGCC GCAGACCGAG GTTCGCATCG TCGATCCGCA CACCGGCGCC GAACTGCCGC CGGGCCGGTC GGGCGAAATC ACGATCCGCA GCCCGGGCGT GTTCCGCGGC TACTGGCGGC GAGACGAGGC AACGCGGGCC GCGATGCAGG ACGGCTTCCT GCGCACCGGC GACATCGGCC AGGTCTCGCC CGACGGCTAC CTGCAATGGC AGGGCCGCCT CAAGGAACTG ATGAAGGTGT CGGGCTACAG CGTGTTCCCG GAAGATGTGG AGGCGCTGCT GTCGCGCCAC CCGGCCATCC GGCAGGTGGC CGTGACACCG ATGCCGGACC CGGACAAGGG CGAGGTGGTC TGCGCCCACA TCGTGCGCAT GAGCGGCATG GCGCTCACCG AAGCCGAGCT GATCGCCTGG TCGCGCGAGA ACATGGCGCC GTACAAGGTG CCGCGCCGGG TGAGGTTCCA CGACGCGCTG CCGGCCACGG CCACCGGCAA GGTGCTGCGG CGACTGTTGC GGGAAGAGGC GGCGGTGGCG GCCTGA
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Protein sequence | MSDGYHRSPP SRAPRIEGCQ HTAGASPSGD TGPRRHAMTA HNREPVEYLA GEMPLHRYCA HHAAQTPERI ALLWYGRTIC WRELDQLSTR LAVQFQRLGV ARGHRVALFL QNCPQAILAH LAAAKLGAIA VPCLPLSRQH ELHDQLADCG AKVLVAAADL MPIVEAARPG TSVDAVITTR YADLQPAQPA CRKALAVPPE LIAADIASAP VGRGQAGSSG QFDLMRLLGE PVDVAERNAV TAIQVDLDEV ALMVYTSGIT GRPKGAMLTH RNALYKTAVT VQTSGIQAAD VLLAAAPLSH IAGMLMGMNL MLYAGAPTIL LYRFDPLAVL QAIDRYRVTW WYSMTPMNLA VMAHPEAGQY RMASLIGNPC TSFGAPLTEA IADRWRAFAG PQCRIYEAAY GLSETHTCDA VMPPDAPRWG WHGKIVPQTE VRIVDPHTGA ELPPGRSGEI TIRSPGVFRG YWRRDEATRA AMQDGFLRTG DIGQVSPDGY LQWQGRLKEL MKVSGYSVFP EDVEALLSRH PAIRQVAVTP MPDPDKGEVV CAHIVRMSGM ALTEAELIAW SRENMAPYKV PRRVRFHDAL PATATGKVLR RLLREEAAVA A
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