Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0052 |
Symbol | xerC |
ID | 1218854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 57356 |
End bp | 58345 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236408 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | NP_518173 |
Protein GI | 17544771 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.578512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGT CTGCACCCGA CGATGACCGC GACGCCCCGG CGCCGCCCCA TCCGCAGATC GGGGCCTACC TCGACGCGCT GAAGTTCGAG CGCAAGCTGT CGCAGCACAC GCTGGCGAGC TACGCCCGCG AGCTGGCCGT GCTGCAGCAG CTCGGCGCGC GGTTCGCGGC GGGCATCGAC CTGATGCGGC TGCAGCCGCA CCACATCCGC CGCATGATGG CGCAGCTGCA CGGCGGCGGC CTGTCGGGCC GCAGCATCGC GCGGGCACTG TCGGCGTGGC GCGGCTGGTA CCAGTGGCTG GCGCTGCGTG ATGCGGCCGT CACCGCCAAC CCGGTCGACG GCATCCGCGC GCCCAAGAGC CCGAAGCGGC TGCCCAAGGC GCTCTCGGTC GAACAGGCCG TCGCACTGAT GGAGCAGTTG CCCGGCGACG ACCCCGAAGC CGTCCGCGAC CGCGCCGTCA ACGAGCTGTT CTATTCGTGC GGGCTGCGGC TGTCGGAACT GGTCGGGCTC GACCTGCGCC ACGCGCAGGC CGGCGACTAC GCCTCGGCGA GCTGGCTCGA CCTGGAGGCT CGCGAAGTGA CGGTGCTCGG CAAGGGCAAC AAGCGCCGGA CCGTACCGGT GGGCAGCAAG GCTGCCGAGG CCCTGGCCGC GTGGCTGGCG GTGCGCCCGC AGCTGGCGCA GCCTGACGCC GCCCCGGAAG ACGCCCACGC GCTGTTCCTG TCGGCGCGCG GCAAGCGGCT GGCGCAGCGG CAGATCCAGA CCCGGATGAA GCGCAACGCC ATCGCCGCGG GCGTGCCGGC GGACGTGCAT CCGCACGTGC TGCGGCATTC GTTCGCCACG CACATGCTGC AATCCTCCGG CGACCTGCGC GCGGTGCAGG AACTGCTCGG GCACGCCAGC ATCGCCAGCA CGCAGGTTTA TACTTCGCTC GATTTCCAGC ACCTGGCCAA GATCTACGAT CAGGCCCACC CGCGCGCAAA GAAGAAATGA
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Protein sequence | MPPSAPDDDR DAPAPPHPQI GAYLDALKFE RKLSQHTLAS YARELAVLQQ LGARFAAGID LMRLQPHHIR RMMAQLHGGG LSGRSIARAL SAWRGWYQWL ALRDAAVTAN PVDGIRAPKS PKRLPKALSV EQAVALMEQL PGDDPEAVRD RAVNELFYSC GLRLSELVGL DLRHAQAGDY ASASWLDLEA REVTVLGKGN KRRTVPVGSK AAEALAAWLA VRPQLAQPDA APEDAHALFL SARGKRLAQR QIQTRMKRNA IAAGVPADVH PHVLRHSFAT HMLQSSGDLR AVQELLGHAS IASTQVYTSL DFQHLAKIYD QAHPRAKKK
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