Gene RSc0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0047 
Symbol 
ID1218849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp51498 
End bp52586 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID637236403 
Producthypothetical protein 
Protein accessionNP_518168 
Protein GI17544766 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAC TGATCCCGGT CACCATCCTG ACGGGCTTTC TCGGCAGCGG GAAGACCACA 
CTGCTCAAGC GCATCCTGAC CGAACAGCAC GGCATGAAGA TCGCCGTGAT CGAGAACGAG
TTCGGCGAGG AGAACATCGA CAACGACATC CTCGTGCAGG ACGGCAACGA GCAGATCGTG
CAGATGAGCA ACGGCTGCAT CTGCTGCACC ATCCGCGGCG ACCTGGTGGC CGCGCTGTCC
GACCTGCTCA CGCGCCGCGA CAAGGGCGAG CTGCAGTTCG ACCGCGTGGT CATCGAGACC
ACCGGCGTGG CCAACCCGGG CCCGGTCGCG CAGACCTTCT TCATGGACGA CGAGATCGCC
GCCCGCTACC TGCTGGACGC CGTCATCACG CTGGTCGACG CCAAGCACGG CAACCAGCAG
CTCGACAGGC AGGAGGAAGC GCAGCGCCAG GTGGGCTTCG CCGACGCGAT CTTCATCACC
AAGGGCGACC TGGTCTCCGA CGACGACGTC GAGGCGCTGC GCCACCGCCT GCTGCACATG
AACCCGCGCG CGCCGATCCG CACCGCCAAC TTCGGCGAGG CGCCGATCGA CACCATCTTC
GACCTGCGCG GCTTCAACCT GAACGCCAAG CTGGAGATCG ACCCCGACTT CCTGCGCGAG
GACGACCACG ATCACGACCA CGGTCATGAG CACAACCACG CCTGCTCGCC CGACTGCGAT
CACGATCACG AGCATGGCCA CGATCACCAT CACGGGCACG GCCATCACCA CCATCACGGC
CACGCGCACC ATACCGACCG CATCGCCTCG TTCGTCTTCC GCAGCGAACG GCCGTTCAAC
TACACCAAGC TGGAGGAATT CCTCTCCGGC GTGCTCAACG TCTACGGCGA GAAGCTGCTG
CGCTACAAGG GCGTGCTGTA CATGGAGGGC GTCGACCGCA AGGTAGTGTT CCAGGGCGTG
CACCAGCTGA TGGGCAGCGA CGTGGGCGGC AAGTGGGACG GCGAGACGCC GGGCAACCGC
ATGGTCTTCA TCGGCGTGGA CCTGCCGCGC GACACCATCC TGAAGGGCCT GGAGAACTGC
CTGGCCTGA
 
Protein sequence
MSKLIPVTIL TGFLGSGKTT LLKRILTEQH GMKIAVIENE FGEENIDNDI LVQDGNEQIV 
QMSNGCICCT IRGDLVAALS DLLTRRDKGE LQFDRVVIET TGVANPGPVA QTFFMDDEIA
ARYLLDAVIT LVDAKHGNQQ LDRQEEAQRQ VGFADAIFIT KGDLVSDDDV EALRHRLLHM
NPRAPIRTAN FGEAPIDTIF DLRGFNLNAK LEIDPDFLRE DDHDHDHGHE HNHACSPDCD
HDHEHGHDHH HGHGHHHHHG HAHHTDRIAS FVFRSERPFN YTKLEEFLSG VLNVYGEKLL
RYKGVLYMEG VDRKVVFQGV HQLMGSDVGG KWDGETPGNR MVFIGVDLPR DTILKGLENC
LA