Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0047 |
Symbol | |
ID | 1218849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 51498 |
End bp | 52586 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236403 |
Product | hypothetical protein |
Protein accession | NP_518168 |
Protein GI | 17544766 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC TGATCCCGGT CACCATCCTG ACGGGCTTTC TCGGCAGCGG GAAGACCACA CTGCTCAAGC GCATCCTGAC CGAACAGCAC GGCATGAAGA TCGCCGTGAT CGAGAACGAG TTCGGCGAGG AGAACATCGA CAACGACATC CTCGTGCAGG ACGGCAACGA GCAGATCGTG CAGATGAGCA ACGGCTGCAT CTGCTGCACC ATCCGCGGCG ACCTGGTGGC CGCGCTGTCC GACCTGCTCA CGCGCCGCGA CAAGGGCGAG CTGCAGTTCG ACCGCGTGGT CATCGAGACC ACCGGCGTGG CCAACCCGGG CCCGGTCGCG CAGACCTTCT TCATGGACGA CGAGATCGCC GCCCGCTACC TGCTGGACGC CGTCATCACG CTGGTCGACG CCAAGCACGG CAACCAGCAG CTCGACAGGC AGGAGGAAGC GCAGCGCCAG GTGGGCTTCG CCGACGCGAT CTTCATCACC AAGGGCGACC TGGTCTCCGA CGACGACGTC GAGGCGCTGC GCCACCGCCT GCTGCACATG AACCCGCGCG CGCCGATCCG CACCGCCAAC TTCGGCGAGG CGCCGATCGA CACCATCTTC GACCTGCGCG GCTTCAACCT GAACGCCAAG CTGGAGATCG ACCCCGACTT CCTGCGCGAG GACGACCACG ATCACGACCA CGGTCATGAG CACAACCACG CCTGCTCGCC CGACTGCGAT CACGATCACG AGCATGGCCA CGATCACCAT CACGGGCACG GCCATCACCA CCATCACGGC CACGCGCACC ATACCGACCG CATCGCCTCG TTCGTCTTCC GCAGCGAACG GCCGTTCAAC TACACCAAGC TGGAGGAATT CCTCTCCGGC GTGCTCAACG TCTACGGCGA GAAGCTGCTG CGCTACAAGG GCGTGCTGTA CATGGAGGGC GTCGACCGCA AGGTAGTGTT CCAGGGCGTG CACCAGCTGA TGGGCAGCGA CGTGGGCGGC AAGTGGGACG GCGAGACGCC GGGCAACCGC ATGGTCTTCA TCGGCGTGGA CCTGCCGCGC GACACCATCC TGAAGGGCCT GGAGAACTGC CTGGCCTGA
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Protein sequence | MSKLIPVTIL TGFLGSGKTT LLKRILTEQH GMKIAVIENE FGEENIDNDI LVQDGNEQIV QMSNGCICCT IRGDLVAALS DLLTRRDKGE LQFDRVVIET TGVANPGPVA QTFFMDDEIA ARYLLDAVIT LVDAKHGNQQ LDRQEEAQRQ VGFADAIFIT KGDLVSDDDV EALRHRLLHM NPRAPIRTAN FGEAPIDTIF DLRGFNLNAK LEIDPDFLRE DDHDHDHGHE HNHACSPDCD HDHEHGHDHH HGHGHHHHHG HAHHTDRIAS FVFRSERPFN YTKLEEFLSG VLNVYGEKLL RYKGVLYMEG VDRKVVFQGV HQLMGSDVGG KWDGETPGNR MVFIGVDLPR DTILKGLENC LA
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