| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0044 |
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| Symbol | |
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| ID | 1218846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 47608 |
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| End bp | 49200 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236400 |
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| Product | substrate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_518165 |
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| Protein GI | 17544763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCC TGCGTCTGCT GCGCGCCGCG AGTGCGGTCG CCACGCTGTC CCTTGCCATG
GCACTCGCAC CCGCCGCGGC CCACGCGCAG CCGCCGTCCA CGCTGGTGGT CGGCCTGTCG
GGCGACATCA CCTCGCTCGA CCCGCACTTC CACAACGTCA CCCCCAACGC GAACGTCGCC
GAGCACCTGT TCGAGACGCT GGTCGCCAAG GACGACAAGA TGCGCATGCG GCCCGGCCTG
GCGATCTCCT GGCGGGCCGT CAGCGACACC GTGTGGGAGC TCAAGCTGCG CCCCGGCGTG
CAGTTCCACG ACGGCAGCGA ATTCACCTCG GCCGACGTGG TGTACTCGCT GGCCCGGCCG
GCCACCATCA AGAACAGCCC GTCGCCGTAC ACCATCTACA CACGCGGCTT CAAGGACGTC
ACGGCGCTCG ACAAGCTGAC CGTGCGCATC ACCACCAACG GACCGTACCC GCTGGTGCCG
AACGACCTGT CGACCCTCTA CATCGTGTCG AAGAAGGCCG CCGAGAAAGC CGGCCCCGAC
GATTTCAACA ACGGCCGCGC GCTGATCGGC ACCGGACCGT ACAAGTTCGT CTCGTTCACC
AAGGGCGACC GCTTGGAGCT GGCGCGCAAC GACGCCTACT GGGGCAAGAA GCCGCAATGG
GATCGCGTGA CGCTGCGCAT CCTGACCGCC GACGCCTCGC GTGTGGCCGC GCTGCTGGCC
GGCGACGTGC AGGTCATCGA GAGCGTGCCG CCGCCCGACA TCAAAAGGCT GGCGGCCAAT
CCGGCGGTCT CGGTGTTCAA GATGCCGGCG TTCCGCCTGA TGTACCTGCA CATGGATTCG
GCGCGCGAGG TCTCGCCGTT CGTGACCGAC AAGGCCGGCC GGCCGCTGGC GAAGAACCCG
CTCAAGGACG TGCGCGTGCG CCAGGCGATC TCGCTGGCGA TCTCGCGCCA GGCCATCGCC
GACCACGTCA TGGAAGGCGC GGCCGAGCCG ACCGGTCAGC TCATCAACAG CACGCTGTTC
GGCCACGTGC CCGGCCTGAA GGCGCCGGTG GCCGACGTGG CCGCCGCGAA GACACTGCTG
GCCCAGGCCG GCTACCCCGA CGGCTTCGGC ATCACGCTGC ACGCCACCAA CAACCGCTAC
GTCAACGACC ACCGCGTCGC GCAGGCGATC GCGTCGATGC TCACGCGCGT GGGCATCGCC
ACCCGGGTGG AGACCATGCC GTCGGCCACG TTCTTCATGC GCGCCAACAA GCTGGAGTTC
TCGTTCCTGC TGGCCGGCTG GGGCGCGGAT ACGGGCGAGG CCAGCTCCTG CCTGAAGGCC
CTGCTGGCCA CCTACGACCC GGCGCGCGGC TGGGGCGCCT CCAACCGGGG CCGCTATTCC
AGCCCCGCGC TCGACGCCAA GCTGGCCGAG GCCCTGCAGA CGCTCGACGA CGCCAGGCGC
GAGAAGCTGC TGCAGGAGGC GACGGAGATC GGCATGCGCG AGGTCGGGGT GATTCCGCTC
TACTTCAACA TCAACGCCTG GGCGGCGCGC AAGGGCTACA CGGTGGTGCC GCACCTGGAC
GACCGCACCC ACGCCTTCGA GGTGACGCGC TAA
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| Protein sequence | MLVLRLLRAA SAVATLSLAM ALAPAAAHAQ PPSTLVVGLS GDITSLDPHF HNVTPNANVA
EHLFETLVAK DDKMRMRPGL AISWRAVSDT VWELKLRPGV QFHDGSEFTS ADVVYSLARP
ATIKNSPSPY TIYTRGFKDV TALDKLTVRI TTNGPYPLVP NDLSTLYIVS KKAAEKAGPD
DFNNGRALIG TGPYKFVSFT KGDRLELARN DAYWGKKPQW DRVTLRILTA DASRVAALLA
GDVQVIESVP PPDIKRLAAN PAVSVFKMPA FRLMYLHMDS AREVSPFVTD KAGRPLAKNP
LKDVRVRQAI SLAISRQAIA DHVMEGAAEP TGQLINSTLF GHVPGLKAPV ADVAAAKTLL
AQAGYPDGFG ITLHATNNRY VNDHRVAQAI ASMLTRVGIA TRVETMPSAT FFMRANKLEF
SFLLAGWGAD TGEASSCLKA LLATYDPARG WGASNRGRYS SPALDAKLAE ALQTLDDARR
EKLLQEATEI GMREVGVIPL YFNINAWAAR KGYTVVPHLD DRTHAFEVTR
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