Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0040 |
Symbol | |
ID | 1218842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 43274 |
End bp | 43852 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236396 |
Product | response regulator transcription regulator protein |
Protein accession | NP_518161 |
Protein GI | 17544759 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAC CCGCCCCCTT CCTGATCCTC GACGACGATG ACGTGTTCGC GCAGACGCTC GCGCGTGCCC TGACCCGCCG CGGCTTCGCG CCGCAGATCG CCCATACCGG CGGCGAGGCG CTGTCGCTGG CCCGCCAGAC GCCCTTCGCG TACGTGACGG TCGACCTGCA CCTGGCCGCC AGCGACCGGG GCCTGATGCC GCACGGGGGC ACCGATTCCG GCCTGCACTG GATCGCCCCG CTGCGCCAGG CGCTGCCCGA GGCGCGCATG CTGGTGCTGA CCGGCTATGC CAGCATCGCC ACCGCCGTGC AGGCGGTGAA GCTGGGCGCG GACGAATACC TGGCCAAGCC GGCCAATGTC GATTCGATCC TGCTCGCGCT GCAGGTGGGC GTGTCCGAAG CGGTGGCCGA GCAGACCATG GAGAACCCGG CGCCGCTGTC GGTGGCGCGG CTGGAGTGGG AGCACATCCA GCGCGTGCTG TCCGAGCACG GCGGCAACAT CTCCGCCACC GCGCGCGCGC TGAACATGCA CCGGCGCACG CTGCAGCGCA AGCTGGGCAA GCGCCCGGTG GCCAAATAG
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Protein sequence | MQQPAPFLIL DDDDVFAQTL ARALTRRGFA PQIAHTGGEA LSLARQTPFA YVTVDLHLAA SDRGLMPHGG TDSGLHWIAP LRQALPEARM LVLTGYASIA TAVQAVKLGA DEYLAKPANV DSILLALQVG VSEAVAEQTM ENPAPLSVAR LEWEHIQRVL SEHGGNISAT ARALNMHRRT LQRKLGKRPV AK
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