Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0031 |
Symbol | slmA |
ID | 1218833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 37200 |
End bp | 37856 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236387 |
Product | nucleoid occlusion protein |
Protein accession | NP_518152 |
Protein GI | 17544750 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG CGCAGACAGG CTTTCCGCCG GCCGAGCTAC AGCCGCAGCC GGCCGCCGAA GCACCCGCAA CGCCCGCCCG CAAGCGCCCG CGCCCTGGCG AGCGCCGCGT GCAGATCCTG CAGACGCTGG CCAGCATGCT GGAGCAGCCG CGTGGCGAAA AAATCACCAC GGCCGGTCTG GCCGCCAGGC TGGATGTCTC CGAAGCCGCG CTCTACCGGC ACTTCGCCAG CAAGGCGCAG ATGTTCGAGG GGCTGATCGA ATTCATCGAG CAAACCGTGT TCGGCCTGAT CAACCAGATC ACGCTGCGCG AAGAGCACGG CCTGCGCCAG GCCCACGCCA TCGCCCACAT GCTGCTGTCG TTCGCCGACA GGAACCCGGG CATGACGCGC GTGCTGGTGG GCGACGCGCT GGTCGGCGAG GACGAACGCC TGCCCGAGCG CATGGCGCAG TGCATGGACC GCATCGAGGC CTCGCTCAAG CAGAGCCTGC GCGTGGCGGT CACGCAGGGC GCCTGGCCGG CCGACGCCGA CATCGCATCG CGCGCCAACC TGATCGTCTG CGTGGTGCTG GGGCGCTGGC ACCGCTACGC CAAGAGCGGC TTCCGCAGGT CGCCGGTGGA AGGGGCGGAG GCGCAGTTGC GGGTGCTGCT GGGCTGA
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Protein sequence | MSNAQTGFPP AELQPQPAAE APATPARKRP RPGERRVQIL QTLASMLEQP RGEKITTAGL AARLDVSEAA LYRHFASKAQ MFEGLIEFIE QTVFGLINQI TLREEHGLRQ AHAIAHMLLS FADRNPGMTR VLVGDALVGE DERLPERMAQ CMDRIEASLK QSLRVAVTQG AWPADADIAS RANLIVCVVL GRWHRYAKSG FRRSPVEGAE AQLRVLLG
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