Gene RSc0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0031 
SymbolslmA 
ID1218833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp37200 
End bp37856 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID637236387 
Productnucleoid occlusion protein 
Protein accessionNP_518152 
Protein GI17544750 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CGCAGACAGG CTTTCCGCCG GCCGAGCTAC AGCCGCAGCC GGCCGCCGAA 
GCACCCGCAA CGCCCGCCCG CAAGCGCCCG CGCCCTGGCG AGCGCCGCGT GCAGATCCTG
CAGACGCTGG CCAGCATGCT GGAGCAGCCG CGTGGCGAAA AAATCACCAC GGCCGGTCTG
GCCGCCAGGC TGGATGTCTC CGAAGCCGCG CTCTACCGGC ACTTCGCCAG CAAGGCGCAG
ATGTTCGAGG GGCTGATCGA ATTCATCGAG CAAACCGTGT TCGGCCTGAT CAACCAGATC
ACGCTGCGCG AAGAGCACGG CCTGCGCCAG GCCCACGCCA TCGCCCACAT GCTGCTGTCG
TTCGCCGACA GGAACCCGGG CATGACGCGC GTGCTGGTGG GCGACGCGCT GGTCGGCGAG
GACGAACGCC TGCCCGAGCG CATGGCGCAG TGCATGGACC GCATCGAGGC CTCGCTCAAG
CAGAGCCTGC GCGTGGCGGT CACGCAGGGC GCCTGGCCGG CCGACGCCGA CATCGCATCG
CGCGCCAACC TGATCGTCTG CGTGGTGCTG GGGCGCTGGC ACCGCTACGC CAAGAGCGGC
TTCCGCAGGT CGCCGGTGGA AGGGGCGGAG GCGCAGTTGC GGGTGCTGCT GGGCTGA
 
Protein sequence
MSNAQTGFPP AELQPQPAAE APATPARKRP RPGERRVQIL QTLASMLEQP RGEKITTAGL 
AARLDVSEAA LYRHFASKAQ MFEGLIEFIE QTVFGLINQI TLREEHGLRQ AHAIAHMLLS
FADRNPGMTR VLVGDALVGE DERLPERMAQ CMDRIEASLK QSLRVAVTQG AWPADADIAS
RANLIVCVVL GRWHRYAKSG FRRSPVEGAE AQLRVLLG