Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0018 |
Symbol | |
ID | 1218820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 21645 |
End bp | 22484 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236374 |
Product | response regulator transcription regulator protein |
Protein accession | NP_518139 |
Protein GI | 17544737 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0928383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCATTC AGATCTTGCT GGTTGAACAG GACCAGGCTG AGGGGGAGCG ACTGTCGTTG TCCCTGCGCG ATGGCGGACA CCACGCCCAG CGCGTCGACA GTCCGGCGCA GGCGCAGGCC GCGATGCAGG CATCGCAGCC GGACCTGCTG CTGATGGAGT GGAACTGGCC GGAATGCGAG TCGATCGACA TGCTGCTGGC CCTGCGTGCC AGCGCGCACA CGCGCAGCCT GCCGGTCATC GTGCTGTCGC GCCACGGCGA CGCGCGCGCC AAGATCGCGG CACTCGATGC CGGCGCCGAC GATTACGTGG TCAAGCCCTG CGATGTGGGC GAGCTGCATG CCCGCATTCG TGCCGTGCTG CGCCGCCGCT CGCCGCAGCA GGGGGACGAG ATCCTGCAGA TCAACGGCCT GCGGCTTGAC CCGCTCACGC TGGGCGTGAC CGCGCAGACG GACGAGGGGC CGCGGCCGGT CGCGCTGAGC CCGCTGGAAT TCCGCCTGCT GCATTTCCTG GTGGCGCATC CGCAGCGCGT GCATTCGCGC ACCCAACTGC TCGACCGCGT CTGGGGCAAC CAGGTCTTCG TGGGCGAACG CACGGTCGAT GTGCACGTCC GCAAACTGCG CGTGGCGCTG GAGGGCACGC TGTGCGATGG CCTGATCCAG ACCGTGCGCG GCGGCGGTTA TCGCCTGCTG GTCGGCAATG GTGTCCACCA GGGGCCATCC GGCGAGGCGA TCGACGCGCA ATTCGAGGTC GCGGCGCGCG AGCATGATGA GTCTTCGGCT TACGAAGGCC CTTCGGCCCG TACCCGCGCT GCCCGGGAGC CGGCCCGCCT GAACGCCTGA
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Protein sequence | MGIQILLVEQ DQAEGERLSL SLRDGGHHAQ RVDSPAQAQA AMQASQPDLL LMEWNWPECE SIDMLLALRA SAHTRSLPVI VLSRHGDARA KIAALDAGAD DYVVKPCDVG ELHARIRAVL RRRSPQQGDE ILQINGLRLD PLTLGVTAQT DEGPRPVALS PLEFRLLHFL VAHPQRVHSR TQLLDRVWGN QVFVGERTVD VHVRKLRVAL EGTLCDGLIQ TVRGGGYRLL VGNGVHQGPS GEAIDAQFEV AAREHDESSA YEGPSARTRA AREPARLNA
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