| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0002 |
|---|
| Symbol | rnpA |
|---|
| ID | 1218804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 718 |
|---|
| End bp | 1113 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637236358 |
|---|
| Product | ribonuclease P protein component |
|---|
| Protein accession | NP_518123 |
|---|
| Protein GI | 17544721 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0594] RNase P protein component |
|---|
| TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.699533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.546638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACGG ATGAGTTCTC ATCCGTTTTT GCTTTGCGGC CGGTCCGGCG TAGCCGTCAC
TTCGTGCTCT ACGTGCGGGC CAACGGCCAT CCCCAGGCGC GCCTGGGGAT CGTGATCGGC
AAGAAGTTCG CCCGTCGCGC CGTCGAGCGC AACCTGATCA AGCGTCAGTG CCGCGAGCTG
TTCCGCTTGC GGCAGGCTGC CCTGGGCGGT CGCGACGTGC TGATCCGCCT GCAGACCAAG
TTTCCGCGCG AAGACGTGCC CACCGTGGCC GCCTTCAAGC GCCTCTGCCG GGAAGAGCTC
TCGTACCTGT TCGAGATCGC GGCGCGCCCG CTGCCCGCGC CACCGGTGCC CTGCCCTGCC
GCCGCGCCGG TTCCCTCCGA CGGAGCCGCG CCATGA
|
|---|
| Protein sequence | MKTDEFSSVF ALRPVRRSRH FVLYVRANGH PQARLGIVIG KKFARRAVER NLIKRQCREL
FRLRQAALGG RDVLIRLQTK FPREDVPTVA AFKRLCREEL SYLFEIAARP LPAPPVPCPA
AAPVPSDGAA P
|
|---|
| |