| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4197 |
|---|
| Symbol | |
|---|
| ID | 3711985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007490 |
|---|
| Strand | + |
|---|
| Start bp | 47658 |
|---|
| End bp | 49148 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640069522 |
|---|
| Product | antisigma-factor antagonist, STAS |
|---|
| Protein accession | YP_345389 |
|---|
| Protein GI | 77404817 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.291756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTT TGACCACCTA CCGCCAGGAG TGGCTGGGCA ACCTGCGGGG CGACCTGCTT
TCGGGCATTG TCGTGGCGCT TGCCCTCATC CCCGAGGCCA TCGCCTTCTC TATCATCGCC
GGGGTCGATC CGAAGGTGGG GCTCTACGCC TCCTTCTCGA TCGCCGTCAT CACCGCCATC
GCGGGCGGAC GGCCAGGGAT GATCTCGGCC GCCACCGCCG CGACCGCCGT GCTGATGGTG
ACCCTCGTGC GCGATCACGG GCTGGAATAT CTGCTGGCGG CGACCGTGCT GGCGGGGCTG
ATCCAGACCA GCGCGGGCTT CCTGCGGCTG GGCTTCGTCA TGCGCTACGT TTCGCGCTCG
GTGATGACGG GCTTCGTCAA TGCGCTGGCG ATCCTGATCT TCCTGGCGCA GCTGCCCGAA
CTCGATCCCC GGACCGTGCC GCCACTGACC TACCTGCTGG TGGCGGGCGG GCTTGCGATC
ATCTACCTGT TCCCGCGGAT CACCCGCGCC GTGCCCTCGC CGCTCGTCAC CATCGTCGTG
CTGACGGCGC TGACCTTCGC GCTGGGGCTC GATGTGCGGA CGGTGGGCGA CATGGGCGCG
CTGCCCGACA CGCTGCCCAT GTTCCTGATC CCCGACATCC CCCTGACCTT CGAGACGCTG
CAGATCATCC TGCCCTATTC CATCGCCGTC GCGGTGGTGG GGCTTCTGGA AAGCCTGATG
ACGCAGAACA TCGTGGACGA CCTGACCGAC ACGCGCTCGA ACCGCAACCA GGAGTGCATC
GGCCAGGGTC TGGCCAACAC CGCCACCGGC TTCATCGGCG GCATGGCGGG CTGCGCCATG
ATCGGCCAGT CGATCATCAA CGTGAAGTCG GGCGGGCGCG GGCGACTGTC GTCCTTTGCC
GCCGGGGTCT ACCTGCTGTT CATGGTGGTC GTGCTGGGCG ATCTGGTCAG CCGGATCCCG
ATGGCGGCGC TGGTGGCGAT CATGATCATG GTCTCGATCG GCACCTTCTC GTGGTCGTCA
GTGAAGTCGC TGCGCACCCA TCCGCGCTCG TCCTCGGTGG TGATGCTGGC GACGGTGGCG
ACCGTGGTCT GGACCCACAA TCTGGCCATC GGCGTTCTGG TGGGCGTCCT GCTGTCGGGG
ATCTTCTTCG CGGCCAAGAT CGCGCAGCTG TTCGGTGTGA CATCAGAGCT GTCTAAGGAC
GGGCGCGAAC GGATCTATAG GGTCGAGGGC CAGCTGTTCT ATGCCTCGGT CGAGGATTTC
ATGGCGGCCT TCGACTTCCG TGAGGCACTC GACCGCGTGG TGATCGACGT GAGCCGCGCC
CATATCTGGG ACATCTCGTC GGTTCAGGCG CTGGACATGG CGGTGCTGAA GTTCCGCCGC
GAAGGTGCCG AGGTGCGGAT CGTTGGTATG AACGAGGCCT CGGAAACCAT GGTGGACCGG
CTGGCCATCC ATGACAAGCC GGGCGCGATG GACCGGCTGG TGGCGCATTG A
|
|---|
| Protein sequence | MISLTTYRQE WLGNLRGDLL SGIVVALALI PEAIAFSIIA GVDPKVGLYA SFSIAVITAI
AGGRPGMISA ATAATAVLMV TLVRDHGLEY LLAATVLAGL IQTSAGFLRL GFVMRYVSRS
VMTGFVNALA ILIFLAQLPE LDPRTVPPLT YLLVAGGLAI IYLFPRITRA VPSPLVTIVV
LTALTFALGL DVRTVGDMGA LPDTLPMFLI PDIPLTFETL QIILPYSIAV AVVGLLESLM
TQNIVDDLTD TRSNRNQECI GQGLANTATG FIGGMAGCAM IGQSIINVKS GGRGRLSSFA
AGVYLLFMVV VLGDLVSRIP MAALVAIMIM VSIGTFSWSS VKSLRTHPRS SSVVMLATVA
TVVWTHNLAI GVLVGVLLSG IFFAAKIAQL FGVTSELSKD GRERIYRVEG QLFYASVEDF
MAAFDFREAL DRVVIDVSRA HIWDISSVQA LDMAVLKFRR EGAEVRIVGM NEASETMVDR
LAIHDKPGAM DRLVAH
|
|---|
| |