| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4116 |
|---|
| Symbol | napA |
|---|
| ID | 3711832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007489 |
|---|
| Strand | + |
|---|
| Start bp | 80744 |
|---|
| End bp | 83239 |
|---|
| Gene Length | 2496 bp |
|---|
| Protein Length | 831 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640069465 |
|---|
| Product | nitrate reductase catalytic subunit |
|---|
| Protein accession | YP_345332 |
|---|
| Protein GI | 77404759 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.568266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA CACGGCGCGA TCTCATCAAG GCTCAGGCCG CCGCCACCGC AGCGGCCGCG
GCAGGTCTGC CGGTCTCAGC ACTGGCCCAG CCTGTCACGG GCGGGGCGGA GGCCTTGCGG
ATCCGCTGGT CGAAGGCGCC CTGCCGCTTC TGCGGGACCG GCTGCGGCGT CATGGTGGGC
ACGCGCGACG GGCAGGTGGT TGCGACCCAC GGTGACACCC AGGCCGAAGT GAATCGCGGC
CTCAACTGCG TGAAGGGCTA TTTCCTGTCC AAGATCATGT ATGGCGAGGA CCGGCTGACC
ACGCCGCTTT TGCGCATGAA GGACGGGGTC TACCACAAGG AGGGCGAGTT CGCGCCCGTC
TCGTGGGACG AGGCCTTCGA TGTCATGGCA GCCCAGGCCA AGCGCGTGCT GAAGGAGAAG
GGCCCGAAGG CCGTCGGCAT GTTCGGCTCG GGGCAATGGA CCATCTGGGA AGGGTACGCG
GCCTCCAAGC TCATGCGGGC GGGCTTCCGA TCGAACAATC TCGACCCCAA CGCGCGCCAC
TGCATGGCGT CGGCCGCCAC CGCCTTCATG CGCACCTTTG GCATGGACGA GCCGATGGGC
TGCTACGATG ATTTCGAGGC CGCCGATGCC TTCGTGCTCT GGGGCTCGAA CATGGCCGAG
ATGCACCCGA TCCTCTGGAG CCGGTTGACC GACCGGCGGC TGAGCCACGA GCATGTGCGC
GTGGCGGTCC TGTCGACCTT CACCCACCGC AGCATGGATC TGGCCGATAC GCCCATCATC
TTCCGGCCGG GCACCGACCT CGCGATCCTG AACTACATCG CCCACCACAT CATCTCCACC
GGCCGGGTCA ACCGGGACTT CGTCGACCGG CACACCAACT TCGCGCTGGG GGCCACCGAC
ATCGGCTACG GGCTGCGCCC CGAGCACCAG CTTCAGCTGG CCGCCAAGGG CGCGGCGGAC
GCGGGTGCGA TGACGCCGAC CGATTTCGAG ACCTTCGCCG CCCTCGTTTC CGAATACACG
CTCGAAAAAG CGGCAGAGAT TTCGGGAGTG GAGCCGGCGC TGCTCGAGGA GCTGGCCGAA
CTCTACGCCG ATCCGGACCG CAAGGTGATG TCTCTCTGGA CCATGGGCTT CAACCAGCAT
GTCCGCGGGG TCTGGGCCAA TCACATGGTC TACAACCTGC ACCTGCTGAC CGGGAAGATC
TCCGAGCCCG GCAACTCGCC TTTCTCGCTC ACCGGCCAGC CCTCGGCCTG CGGCACCGCG
CGCGAAGTGG GCACCTTCGC CCACCGCCTG CCTGCCGACA TGGTGGTGAC CAATCCCGAG
CACCGCGCGC ACGCCGAGGA GATCTGGAAG CTGCCCGCGG GACTTCTCCC CGACTGGGTG
GGCGCCCATG CGGTCGAGCA GGACCGCAAG CTCCACGACG GCGAGATCAA TTTCTACTGG
GTGCAGGTCA ACAACAACAT GCAGGCCGCC CCCAACATCG ACCAGGAGAC CTATCCGGGA
TACCGCAATC CCGAGAATTT CATCGTGGTC TCGGATGCCT ATCCGACCGT CACCGGCCGC
TGCGCCGATC TCGTGCTTCC GGCGGCCATG TGGGTCGAGA AGGAGGGTGC CTATGGCAAT
GCCGAGCGGC GCACCCACTT CTGGCACCAG CTCGTCGAGG CGCCGGGCGA GGCGCGCTCG
GATCTCTGGC AGCTCATGGA ATTCTCCAAG CGCTTCACGA CCGACGAGGT CTGGCCCGAG
GAGATCCTCT CGGCAGCGCC CGCCTATCGC GGCAAGACAT TGTTCGAGGT GCTCTTCGCC
AACGGCTCGG TGGACCGGTT CCCGGCCAGC GACGTGAACC CCGACCATGC CAACCACGAG
GCCGCGCTCT TCGGCTTCTA TCCGCAGAAG GGCCTCTTCG AGGAATATGC CGCCTTCGGA
CGCGGCCATG GCCACGATCT CGCTCCCTTC GACACCTATC ACGAGGTGCG CGGTCTGCGC
TGGCCCGTGG TCGAGGGCGA GGAGACCCGC TGGCGCTATC GCGAGGGCTT TGATCCCTAT
GTGAAGCCGG GCGAGGGGCT GCGCTTCTAC GGCAAGCCCG ACGGACGCGC GGTCATCCTC
GGTGTGCCCT ACGAGCCTCC CGCCGAGAGC CCAGACGAGG AGTTCGGCTT CTGGCTCGTG
ACGGGGCGCG TACTCGAGCA CTGGCACTCC GGCTCCATGA CGCTGCGCGT GCCCGAGCTC
TACAAGGCCT TCCCGGGAGC CGTCTGCTTC ATGCATCCCG AGGATGCGCG CTCCCGCGGG
CTCAATCGCG GATCCGAGGT GCGGGTGATC TCGCGGCGGG GCGAGATCCG CACGCGGCTC
GAGACCCGAG GCCGCAACCG GATGCCGCGC GGCGTGGTGT TCGTGCCCTG GTTCGACGCG
AGCCAGCTCA TCAACAAGGT GACGCTCGAC GCGAACGATC CGATCTCGCG GCAGACGGAC
TTCAAGAAAT GTGCCGTGAA AATCGAGGCG GTGTGA
|
|---|
| Protein sequence | MTLTRRDLIK AQAAATAAAA AGLPVSALAQ PVTGGAEALR IRWSKAPCRF CGTGCGVMVG
TRDGQVVATH GDTQAEVNRG LNCVKGYFLS KIMYGEDRLT TPLLRMKDGV YHKEGEFAPV
SWDEAFDVMA AQAKRVLKEK GPKAVGMFGS GQWTIWEGYA ASKLMRAGFR SNNLDPNARH
CMASAATAFM RTFGMDEPMG CYDDFEAADA FVLWGSNMAE MHPILWSRLT DRRLSHEHVR
VAVLSTFTHR SMDLADTPII FRPGTDLAIL NYIAHHIIST GRVNRDFVDR HTNFALGATD
IGYGLRPEHQ LQLAAKGAAD AGAMTPTDFE TFAALVSEYT LEKAAEISGV EPALLEELAE
LYADPDRKVM SLWTMGFNQH VRGVWANHMV YNLHLLTGKI SEPGNSPFSL TGQPSACGTA
REVGTFAHRL PADMVVTNPE HRAHAEEIWK LPAGLLPDWV GAHAVEQDRK LHDGEINFYW
VQVNNNMQAA PNIDQETYPG YRNPENFIVV SDAYPTVTGR CADLVLPAAM WVEKEGAYGN
AERRTHFWHQ LVEAPGEARS DLWQLMEFSK RFTTDEVWPE EILSAAPAYR GKTLFEVLFA
NGSVDRFPAS DVNPDHANHE AALFGFYPQK GLFEEYAAFG RGHGHDLAPF DTYHEVRGLR
WPVVEGEETR WRYREGFDPY VKPGEGLRFY GKPDGRAVIL GVPYEPPAES PDEEFGFWLV
TGRVLEHWHS GSMTLRVPEL YKAFPGAVCF MHPEDARSRG LNRGSEVRVI SRRGEIRTRL
ETRGRNRMPR GVVFVPWFDA SQLINKVTLD ANDPISRQTD FKKCAVKIEA V
|
|---|
| |