Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4086 |
Symbol | |
ID | 3711961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007489 |
Strand | - |
Start bp | 45443 |
End bp | 46525 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640069438 |
Product | polysaccharide export protein |
Protein accession | YP_345305 |
Protein GI | 77404732 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.194923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGAG TGGCGCGCCG AACGATCCTG GCCCTGACGA GCAGTCTCGC CCTGCTGTCG GGCTGCTCGG AGGGGCATGT GCGGTTTCCG GTGACGGAGA GGGCGCAGGC GTCGCTGCCT TCGGACGTGC AGGTGATCCG GCTCGATGCG TCGAACATTT CGAGCTTCGA GCGGCCGGCC GAGCCGCACC GGGCGACGGC TCTTCCGAAG GTGGGGAGGT GGGCCTACCG GATCGGGAGC GGGGATCTGC TCGGCATCGT CGTCTTCGAT CACCCAGAAC TGACGATGCC GGCCGGGCCG GAGGCGAAGG CCGGGGAGAA CAGCTTCCGG GTGCAGGCGG ACGGCACGAT CGTCTATCCC TATGTGGGCT CGATCCGGGC GGAGGGCCGG GGGCCGGAGG AGGTGCGCGA GGAGCTGCGG GAGCGGCTGG CGGCCTTCGT TCCGGATCCC CAGGTGGATG TGCGGGTGCT GGGGTTCCAG TCGCAGGCGG TGAGCGTGAC GGGGGAGGTG GAGACCCCGA ACCGCCAGCC GCTCACGACG GTGGCGCTGA CGCTGCTCGA TGCGATCAAC GCGGCGGGGG GGCTGACGGA GACTGCGGAC ACGCGCCGCG TGACGGTGCG GCGGGGCGGC CAGTCCTACC GGGTGGATCT GGACGGATTT CTGAGTGCGG GCCTTGGGCA GAACAACCCC GTGCTGCGGC CCGGAGACAT TGTGACGGTT CCCCGGCGAC GGGCGGAGGA GGCCTATCTT CTGGGCGAGA TCGTGAAGCC TGCGGCGGTG GATCTCTCGC TCGAGCCGCT CACCCTGACC CAGGCTCTGA CCCGTCAGGG CGGGATCCTC GAGCGTCGGG CGGATGCACG CGGGGTCTTT GTCTTCCGCG GCAAGGGCGG GACGGGGATG ACGGTGTTCC AGCTCGATGC CCGCTCGCCC ACGGCGCTGC TTCTGGGCAC GCGGTTCCTG CTGCAGCCGA GCGACGTGGT CTATGTCACA CGGGCGCCGC TCAGCCGGTG GAACGACACG ATCAGCGACC TGCTGCCGAC GGTGGGGGCT GCGGGGAGTG TCGACCGTCT GGGTGCGAAC TGA
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Protein sequence | MPGVARRTIL ALTSSLALLS GCSEGHVRFP VTERAQASLP SDVQVIRLDA SNISSFERPA EPHRATALPK VGRWAYRIGS GDLLGIVVFD HPELTMPAGP EAKAGENSFR VQADGTIVYP YVGSIRAEGR GPEEVREELR ERLAAFVPDP QVDVRVLGFQ SQAVSVTGEV ETPNRQPLTT VALTLLDAIN AAGGLTETAD TRRVTVRRGG QSYRVDLDGF LSAGLGQNNP VLRPGDIVTV PRRRAEEAYL LGEIVKPAAV DLSLEPLTLT QALTRQGGIL ERRADARGVF VFRGKGGTGM TVFQLDARSP TALLLGTRFL LQPSDVVYVT RAPLSRWNDT ISDLLPTVGA AGSVDRLGAN
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