| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3855 |
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| Symbol | |
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| ID | 4796518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009007 |
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| Strand | - |
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| Start bp | 25733 |
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| End bp | 28822 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640102969 |
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| Product | hemolysin-type calcium-binding protein |
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| Protein accession | YP_001033818 |
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| Protein GI | 125654624 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.460711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTC TTCCGACCTT CAGCGTCACC AGCACCCCCG TCGTCGAGGG CAATTACCTC
ACCTACACCA TCCGGCTCTC CGAGCCCGCC CCCGATGCGG TGAGCGTGGA TTACCTGTTC
CGCTCCGGCA CCGCGCTGCT CGACGAGGAT TTCTATTCCA CCGCCCCCTC GGGCACGCTC
GTCTTCGCCC CCGGCGAGAC GGTGCTGACC CTCCAGATCC GGTCCTACAA CGACAGGCTC
GACGAGATCG ACGAGAGCTT CTTTCTCGAA CTGAGCGATC CGCAGGGCGC GCAGTTCGGC
GCCAACATCT CGACCCTCGT CACCGCGGGC TGGGTGATCG ACGACGATGG CGTGGGGGTG
AACCGGGCGC TGGCCGTCTC GAACCCCGTG GTGACCGAGG CCGCGGGCGG GCAGGCGCTC
TTCACCCTCA CGCTGTCGGA GGCCTTCACC ACCGACCGCA GCTTCACCTA CACGACCTAC
GATGGGTCGG CCCGGGCGGG CGCGGATTAC GTGGCCCGCA CCGGCACAGT CACCTTCCTC
GCCGGCCAGA CCGAGGCCAC GGTCGCGGTC AATCTGATCA ACGATGGCGC CGTCGAGGCG
GGCGAGACCT TCGGCCTCGC GGTCACCGGC GCCCATGGCG TGCCCGCCGC GACCGGCACG
GCCGAGATCC TGAACGACGA CGGGCCGGTG CCGGTGATCT CGGTCGAGGG CGACCGGGTG
GTCGAGGGCA GCTACCTCAC CTATACGATC CGGCTCTCCG AGCCCGCGAC CGACGCGGTG
AGCGTGGATT ACCTGTTCCG CTCGGGCACC GCGCTGCTCG ACGAGGATTT CTATTCCACC
GCCCCCTCGG GCACGCTCAC CTTCGCCCCG GGCGAGACGG TGCAGACCCT CCGCATCCGC
TCCTACAACG ACAGTCTCGA CGAAATCGAC GAGAGCTTCT TTCTCGAGCT GAGCGAACCG
CAGGGCGCGC GGTTCGGCGC CAACATCTCG ACCCTCGTCA CGACGGGCTG GGTGATCGAC
AATGACGGCG TGGGGGTGAA CCGGGCACTG GCCGTCTCGA ACCCGGTGGT GACCGAGGCC
GCAGGCGGGC AGGCGCTCTT CACCCTCACG CTGTCGGAGG CCTTCACCAC CGACCGCAGC
TTCACCTACA CGACCCATGA CGGCTCGGCC CGGGCAGGCG CGGATTATGT TGCCCGCACC
GGCACCGTCA CCTTCCTCGC CGGCCAGACC GAGGCCACGG TCGCGGTCAA TCTGATCAAC
GATGGCGCGG TCGAGGCGGG CGAGACCTTC GGTCTGGCCG TCACCGGCGC CCATGGCGTG
CCCGCCGCCA CCGGCACGGC CGAGATCCTG AACGACGACG GGCCGGTGCC AGTGATCTCG
GTCGAAGGCG ACCGGGTGGT CGAGGGCAGC TACCTCACCT ATACGATCCG GCTCTCCGAG
CCCGCGACCG ACGCGGTGAG CGTGGATTAC CAGTTCCGCT CCGGCACCGC GCTGCTCGAC
GAGGATTTCT ATTCCACGGC CCCCTCGGGC ACCCTCACCT TCGCCCCCGG CGAGACGGTG
CAGACCCTCC GCATCCGTTC CTACAACGAC AGTCTCGACG AGATCGACGA GAGCTTCTTT
CTCGATCTGA GCGATCCCCG CGGCGCGCAG TTCGGCGGCG GCAACCGCGC CCTGTCCACC
GGCGGCTGGG TGCTCGACAA TGACGGGGTG GGGCTGAACC GCTCGGTCTC GGTCGGCCAT
GCCACGCTGC AGGAAGGGCC CGGCGGCCGG GTCGCGGTCT TCGTGGTCGA GCTTTCGGCC
GCCTCGGCCG AGCGGATCGC CATCGGCTTC CAGACCCTCG CCGGGACGGC CCGCCCGGGC
AGCGACTTCG CCGCCCGGTC GGGCGAGGTG GTCTTCCTGC CCGGCCAGAC CCGGGCCGAA
ATTCTCATCC CCATCCTCGA CGATCTCGTG CTCGAGAATA CCGAGAGCTT CAGCCTACGC
CTCGTGCCGC CCTTCCCCAG CGCCATCTCC TCGGCCACGC CGGTGCCGGT GGGGGTGGCC
ACCCTCCTCG ACGGCACGCT CCGCGGCTCG GGCGGCAACG ACCGGCTGAT CGGCACGGCC
AATGCCGAGC GGATCGAGGG GTTCGGCGGC AACGACCGGA TCGAGGGCCG GGGCGGCAAT
GACCTTCTGT CGGGCGGCGC GGGCAACGAC CTGCTCGACG GCGGCGGCGG ACGCGACCGG
ATGGTGGGGG GCACGGGCAA CGACCGCTAT ATCGTCAACC ATGCCGGGGA CAGCACGATC
GAGCTGGCCG GGGGCGGTAT CGACACGGTG CAGAGCAGCC TCTCCTGGAC CCTGGCCGCC
AATGTCGAGC GGCTGGTGCT GACCGGCGGG GCTGCCCTGT CGGGCACCGG CAACGGGCTT
GCGAACCTGC TCACCGGCAA TGGCGGGGCG AACCGGCTGC AGGGGCTTGC CGGCAACGAC
ACGCTGAACG GCGGCGGCGG GCGCGACGTC ATGATCGGCG GGACGGGCAA CGACACCTAC
ATCACCGATG GCGGCGACAC GATCGTGGAG CGCGCGGGCC AGGGGGTGGA TGTGGTGCGC
GCCTCGGTCA GCTACACGCT GGGCGCCCAG CTCGAGACGC TGGTGCTGAC GGGCACGGCG
AACCTTTCGG GGACCGGCAA CGGGCTTTCG AACCTGCTGA TCGGCAATGG CGGCGCGAAC
CGGCTGAGCG GCGGCGCCGG CAACGACACG CTGAGCGGCG GCGGCGGGGC GGATCTGCTG
ATCGGCGGCG CCGGGCGCGA CAGCTTTGTC TTCAACACCC GCCCCGGGCC CGGCGCGATC
GACCGGATCG CGGATTTCAA CGTGGCCGAC GACGTGATCC ATCTGGAAAA TGCGGTGTTC
CGCGGCCTTC CGGCGGGGGC GCTGCGCGGG GCGGCCTTTG CCTCCAACCT CTCGGGACAG
GCCACCGATG CGGCCGACCG GATCCTCTAT GAGCGCGACA CCGGGGCGCT CTGGTTCGAT
GCCGACGGCA CCGGAGGGGG CGCGCGGGTG CAGATCGCGA CCCTCTCGGC GGGGCTCGGC
CTGACGGCCG CGGATTTCTT CGTGATCTGA
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| Protein sequence | MAILPTFSVT STPVVEGNYL TYTIRLSEPA PDAVSVDYLF RSGTALLDED FYSTAPSGTL
VFAPGETVLT LQIRSYNDRL DEIDESFFLE LSDPQGAQFG ANISTLVTAG WVIDDDGVGV
NRALAVSNPV VTEAAGGQAL FTLTLSEAFT TDRSFTYTTY DGSARAGADY VARTGTVTFL
AGQTEATVAV NLINDGAVEA GETFGLAVTG AHGVPAATGT AEILNDDGPV PVISVEGDRV
VEGSYLTYTI RLSEPATDAV SVDYLFRSGT ALLDEDFYST APSGTLTFAP GETVQTLRIR
SYNDSLDEID ESFFLELSEP QGARFGANIS TLVTTGWVID NDGVGVNRAL AVSNPVVTEA
AGGQALFTLT LSEAFTTDRS FTYTTHDGSA RAGADYVART GTVTFLAGQT EATVAVNLIN
DGAVEAGETF GLAVTGAHGV PAATGTAEIL NDDGPVPVIS VEGDRVVEGS YLTYTIRLSE
PATDAVSVDY QFRSGTALLD EDFYSTAPSG TLTFAPGETV QTLRIRSYND SLDEIDESFF
LDLSDPRGAQ FGGGNRALST GGWVLDNDGV GLNRSVSVGH ATLQEGPGGR VAVFVVELSA
ASAERIAIGF QTLAGTARPG SDFAARSGEV VFLPGQTRAE ILIPILDDLV LENTESFSLR
LVPPFPSAIS SATPVPVGVA TLLDGTLRGS GGNDRLIGTA NAERIEGFGG NDRIEGRGGN
DLLSGGAGND LLDGGGGRDR MVGGTGNDRY IVNHAGDSTI ELAGGGIDTV QSSLSWTLAA
NVERLVLTGG AALSGTGNGL ANLLTGNGGA NRLQGLAGND TLNGGGGRDV MIGGTGNDTY
ITDGGDTIVE RAGQGVDVVR ASVSYTLGAQ LETLVLTGTA NLSGTGNGLS NLLIGNGGAN
RLSGGAGNDT LSGGGGADLL IGGAGRDSFV FNTRPGPGAI DRIADFNVAD DVIHLENAVF
RGLPAGALRG AAFASNLSGQ ATDAADRILY ERDTGALWFD ADGTGGGARV QIATLSAGLG
LTAADFFVI
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