Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3590 |
Symbol | rpsA |
ID | 3722107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 681706 |
End bp | 683391 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640073256 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_355094 |
Protein GI | 77465591 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.019363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGCTA AAGCAACCAT GGAAGAATTC GAGGCCCTCC TGAACGAGAG CCTCCAGATC GACACCCCCC AGGAGGGGTC GGTCGTGAAG GGCAAGGTCA TCGCCGTCGA AGCGGGCCAG GCCATCATCG ACGTCGGCTA CAAGATGGAA GGCCGCGTCG ACCTGAAGGA ATTCGCCGAC ATGTCGGGCT CGGTCGACAT CTCGGTCGGG GATGAGGTCG AGGTCTATCT CGACCGGGTC GAGAATGCCC GTGGCGAGGC CGTCATCAGC CGTGACAAGG CCAAGCGCGA GGAAGCCTGG GACCGTCTCG AGAAGGCCTA TGCCAACGAG ACCCGCGTCG AGGGCGCGAT CTTCGGCCGC GTCAAGGGCG GCTTCACCGT CGATCTCGGC GGCGCCGTGG CCTTCCTGCC CGGTTCGCAG GTCGATGTGC GCCCCGTGCG CGATGCGGGC CCCCTGATGG GCATGAAGCA GCCGTTCCAG ATCCTGAAGA TGGACCGTCG CCGCGGCAAC ATCGTCGTGT CGCGTCGCGC CATCCTCGAA GAGAGCCGCG CCGAACAGCG CGCCGAGGTC ATCTCGAACC TCTTCGAAGG CCAGACCGTT GACGGCGTCG TCAAGAACAT CACCGAATAC GGTGCGTTCG TCGATCTCGG CGGCGTGGAC GGCCTGCTGC ACGTCACCGA CATGGCGTGG CGCCGCGTGA ACCACCCCTC GGAGATCCTG TCGATCGGCG AGACCGTGAA GGTCCAGGTC ATCAAGATCA ACAAGGAAAC CCACCGCATC AGCCTGGGCA TGAAGCAGCT CCAGTCGGAT CCGTGGGATG CGGTGGAAAA AGCCTATCCG ATCGGCTCGG TCCACAAGGG CCGCGTGACC AACATCACCG ACTACGGCGC GTTCGTCGAG CTGGAAGCCG GTGTCGAAGG TCTGGTCCAC GTCTCGGAAA TGAGCTGGAC CAAGAAGAAC GTGCACCCCG GCAAGATCGT CTCGACCTCG CAGGAGGTGG ACGTCATGGT GCTGGAAATC GACAGCGCCA AGCGCCGCGT GTCGCTCGGT CTCAAGCAGA CCATGCGCAA CCCGTGGGAA GTCTTTGCCG AAACCCATCC GGTCGGCACG CCGATCGAGG GCGAGGTCAA GAACATCACC GAATTCGGTC TGTTCGTGGG TCTCGAGCAC GATATCGACG GCATGGTGCA CCTCTCGGAT CTCAGCTGGG ATCAGCGCGG CGAGGAAGCC ATCCAGAACT ACCGCAAGGG CGACGTCGTG AAGGCGGTGG TGACCGAGGT CGACACCGAC AAGGAGCGGA TCTCGCTCTC GATCAAGGCG CTCGGCGACG ACACCTTCTC GGAAGCCATC GAAGGCGTGA AGCGGGGCTC GGTCATCACC GTGACCGTGA CGGCGATCGA GGACGGCGGC ATCGAGGTCG AATACAACTC GATGAAGTCG TTCATCCGTC GTTCGGACCT GTCGCGCGAC CGCGCCGACC AGCGTCCGGA GCGGTTCCAG GTGGGCGACA AGGTGGATGT CCGCGTGACC AACGTGGATG CCAAGACCCG TCGCCTCGGC CTGTCGATCA AGGCGCGCGA GATCGCCGAA GAGAAGGAAG CCGTCGAACA GTACGGTTCG TCCGATTCGG GCGCCTCGCT GGGCGACATC CTCGGCGCGG CGCTGCGCAA CAGCGATCGC GGCTGA
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Protein sequence | MCAKATMEEF EALLNESLQI DTPQEGSVVK GKVIAVEAGQ AIIDVGYKME GRVDLKEFAD MSGSVDISVG DEVEVYLDRV ENARGEAVIS RDKAKREEAW DRLEKAYANE TRVEGAIFGR VKGGFTVDLG GAVAFLPGSQ VDVRPVRDAG PLMGMKQPFQ ILKMDRRRGN IVVSRRAILE ESRAEQRAEV ISNLFEGQTV DGVVKNITEY GAFVDLGGVD GLLHVTDMAW RRVNHPSEIL SIGETVKVQV IKINKETHRI SLGMKQLQSD PWDAVEKAYP IGSVHKGRVT NITDYGAFVE LEAGVEGLVH VSEMSWTKKN VHPGKIVSTS QEVDVMVLEI DSAKRRVSLG LKQTMRNPWE VFAETHPVGT PIEGEVKNIT EFGLFVGLEH DIDGMVHLSD LSWDQRGEEA IQNYRKGDVV KAVVTEVDTD KERISLSIKA LGDDTFSEAI EGVKRGSVIT VTVTAIEDGG IEVEYNSMKS FIRRSDLSRD RADQRPERFQ VGDKVDVRVT NVDAKTRRLG LSIKAREIAE EKEAVEQYGS SDSGASLGDI LGAALRNSDR G
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