Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3555 |
Symbol | xdhB |
ID | 3721969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 648142 |
End bp | 650619 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640073219 |
Product | xanthine oxidase |
Protein accession | YP_355057 |
Protein GI | 77465554 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTCG GTCGCGCCCT GCCGCACGAT GCGGCCCCGC TTCACGTCAC CGGCGCTGCG CGCTATGTGG ACGACTTGCC CACCCCGCGC GGCACGCTGC ATCTGGCCTT CGGCCTGTCG CCCGTGGCCC ATGGCGAGAT CCTGACCCTC GATCTCGACC CGGTGCGCCG GATGCCGGGC GTGGTGCGGG TGATCGGGCC CGGCGATCTC GATCCGATGC CCGACTGCTC GCCCTCGGCC CATGACGAGC CGCTCCTTGC AGTGGGCCGC GTGCAGTATG TGGGCCAGCC GCTCTTCCTC GTCGTGGCCG AGAGCCACCG CGCCGCCCGC CGCGCAGCGC GCGCCGCGCG CCCCGAGATC CGGCCCCTGC CCGCGATCCT GACCGTCGAG GAGGCGCTCG CCGCGAATGC CCGCTTCGAG GCGGGGCCCG TCGTCTGGGA GAAGGGCCGC GCGGCCGAAG CCATCGCCAC AGCCCCGCAC CGGATCGAGG GAACGATGGA GGTGGGGGGA CAGGAGCATT TCTACCTCGA GGGTCAGGTG GCGCTCGCCC TGCCGCAGGA GGCGGGCGAC ATGCATGTCC ATTCTTCCAC CCAGCATCCG ACCGAGATCC AGCACAAGGT GGCCCATGCG CTGGGACTGC CCATGAGCGC GGTGCGGGTC GAGGTGCGGC GCATGGGCGG CGGCTTCGGC GGCAAGGAGA GCCAGGGCAA TGCGCTGGCC ATCGCCTGCG CACTGGCCGC CCGCGCGACG GGGCGGCCCT GCAAGATGCG CTACGACCGC GACGACGACA TGGCGATCAC CGGCAAGCGC CACGACCTTC GGATCGACTA TCGCGCGGGC TTCGATGACG AAGGGCGGCT CGCGGGCGTC GAGTTCCGCC ATCTCTTCCG TTGCGGCTGG TCGCAGGACC TGTCGCTGCC GGTGGCGGAT CGGGCGATGC TCCATGCCGA CAATGCCTAT CACCTGCCCG CGGTGCGGAT CGAGAGCCAC CGGCTGCGCA CCCATACCCA GAGCGCCACC GCCTTCCGCG GCTTCGGCGG CCCGCAGGGC ATGATCGGGA TCGAGCGGGT GATGGACCAT GTGGCCCATG CGGTGGGGCG CGATCCTCTG GCGGTGCGGC AGGCGAACTT CTACGCGCCG ATGGGGCAGG TCGGGGGCGG ACGTGCCGCG GATCCGGCGG GAAGGCCGGG GGCGCTGCCC CCGGACCCCC GGGATATTTC CGCCAGAATG AAGGAGGAGG AGACGGAGGC GCGGGCGCGG CTCGGGGCGG AGGAGGTGGA TCTGACCTCG CGCGGGGCGG AGGCGATGGA GCACGATCTG CCGCCGCCCG CGCCCGAGGG GGTGCAGACC ACGCCCTATC ACATGCCGGT CGAGGATTTC ATCGGCGACG CGCTGGTGGC GGAGCTCGCC GAGCGGGCGG ACTATGCCCG CCGCCGCGCC GAGATCGGCG ACTGGAACCG GCAGAGCCCG ATCCTGAAGC GCGGCATCGC GCTGACGCCG GTGAAGTTCG GCATCTCCTT CACGCTCAGC TGGCTGAACC AGGCGGGGGC GCTGGTCCAT ATCTATCAGG ACGGCTCGGT GCATCTGAAC CATGGCGGGA CCGAAATGGG ACAGGGGCTG TTCCAGAAGG TGGCGCAGGT GGCAGCGGCC GAACTGGGGC TGCCGGTCGA GGCGGTGAAG ATCACGCCGA CCGACACGGG CAAGGTGCCG AACACCTCGG CCACGGCGGC CTCGTCGGGA TCGGACCTGA ACGGAATGGC GGTGCGTGCG GCCTGCGTCA CGCTGCGGGA TCGGCTGGCG GAGCTGGTGG CCGAGCGGCA TCAGGCGCGG GCGGAGGAGG TGCGGTTCGA GGAGGGGCGC GTGCGCGTGG GCGGCGCGGA TCTCTCCTTT GCCGAAGTGG CGGCCATGGC CTATCAGGCG CGCGTGCCCC TTTCGGCCAC CGGCTACTAC CGGACGCCGA AGATCGTCTG GGACCGGCTG AAGGGGCGCG GGCGGCCGTT CTTCTACTTC GCCTACGGGG CGGCCGTGTC GGAGGTGGCG ATCGACAGCC TCACCGGCGA GAACCGGATC CTGCGCGCGG ACATCCTGCA TGACACGGGC ACGAGCCTCA ATCCGGCGCT CGATCTGGGG CAGATCGAGG GCGGCTATGT GCAGGGCGCC GGGTGGCTTA CCACCGAGGA GCTGGTCTGG GACGCCGAGG GGCGGCTGCG GACCCATGCG CCGTCGACCT ACAAGATCCC CGCCTGTTCG GACCGGCCGC GGATCTTCAA TGTGGCGCTC TGGAACCGGC CCAACCCCGA GGAGACCGTG GGCCGCTCGA AGGCCGTGGG CGAGCCGCCC TTCATGCTCG GGATCTCGGT GCTGATGGCG CTCTCGGAGG CGGTGGCGGC CTGCGGCGAC GGCAGCATCT ATCCGGCGCT CGATGCGCCC GCGACGCCCG AGCGGATCCT TGCCGCGGTG AGGCGGCAGC GTGGCTGA
|
Protein sequence | MSLGRALPHD AAPLHVTGAA RYVDDLPTPR GTLHLAFGLS PVAHGEILTL DLDPVRRMPG VVRVIGPGDL DPMPDCSPSA HDEPLLAVGR VQYVGQPLFL VVAESHRAAR RAARAARPEI RPLPAILTVE EALAANARFE AGPVVWEKGR AAEAIATAPH RIEGTMEVGG QEHFYLEGQV ALALPQEAGD MHVHSSTQHP TEIQHKVAHA LGLPMSAVRV EVRRMGGGFG GKESQGNALA IACALAARAT GRPCKMRYDR DDDMAITGKR HDLRIDYRAG FDDEGRLAGV EFRHLFRCGW SQDLSLPVAD RAMLHADNAY HLPAVRIESH RLRTHTQSAT AFRGFGGPQG MIGIERVMDH VAHAVGRDPL AVRQANFYAP MGQVGGGRAA DPAGRPGALP PDPRDISARM KEEETEARAR LGAEEVDLTS RGAEAMEHDL PPPAPEGVQT TPYHMPVEDF IGDALVAELA ERADYARRRA EIGDWNRQSP ILKRGIALTP VKFGISFTLS WLNQAGALVH IYQDGSVHLN HGGTEMGQGL FQKVAQVAAA ELGLPVEAVK ITPTDTGKVP NTSATAASSG SDLNGMAVRA ACVTLRDRLA ELVAERHQAR AEEVRFEEGR VRVGGADLSF AEVAAMAYQA RVPLSATGYY RTPKIVWDRL KGRGRPFFYF AYGAAVSEVA IDSLTGENRI LRADILHDTG TSLNPALDLG QIEGGYVQGA GWLTTEELVW DAEGRLRTHA PSTYKIPACS DRPRIFNVAL WNRPNPEETV GRSKAVGEPP FMLGISVLMA LSEAVAACGD GSIYPALDAP ATPERILAAV RRQRG
|
| |