| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3513 |
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| Symbol | |
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| ID | 3721929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 592286 |
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| End bp | 593266 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640073179 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_355017 |
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| Protein GI | 77465514 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.668666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGG ACTGCGAGAA ACTTCTCGAC GAGCCCGGAC GGCTGGCCGC CGTCCGGCGC
TATGCCGTGC TCGATACGGC GCCGGAAGAG CCGTTCGACA AGCTCACTCG GCTGGTCTGC
AACGTGCTCG AGGTGCCGTA TGCGGCGGTG ACCCTCATCG ACGCGGACCG CCAGTGGTTC
AAGTCTCTTG TCGGTCTGAG CGGGTCCGAG GGCCCGCGCC ACGAGTCCTT CTGCACCCAC
ACGATCAAGA CGCGCGACCC GATGATCGTC CCCGACGCCA CGCTCGATCC GAGGTTCCGG
GACAGTCCGC TGGTCACGGG GGCGGCCGGC ATCCGCAGCT ACCTCGGCGT TCCGCTCGAA
ACACCGGACG GCTACAATCT CGGGGCGCTC TGCGCCGTCG ATACCGCCCC CCGGACCTTC
AGCACCTCCC AGATCGAGAT CATGAAGAGC TTCGCCTCGC TGGTTCTCGA CGAGCTGGAA
CTCCGGCAGA TCGCGCTCAG CGACGCGCTG ACCGGCGCCA TGACGCGCCG CGGCTGGCTT
GCCGCGGTCG AGAAGGAGAT GGCGCGCGGC GCGCGTCAGG GGACGCAGGC GGCCATCGTC
CTCTTCGACG TCGATCACTT CAAGGCGATC AACGACACCC ATGGACATGC GGTGGGCGAT
GCCGTGCTGC AGGCCCTGAC GCGGCGCTGC CTGCTGCATC TGGGCCCGGC CGATGCACTG
GGACGGATCG GGGGAGAGGA GTTCGCGGTG CTGGTGCCGG ACGCGGGCCT GCCCGAGGCG
ATGGAACTGG CAGAGCGCCT GCGCCGCAGC TTCTCCGACG CGCCGATCGA GGTGGCGGGC
CAGGCGCTCC GGGTCACCGC CAGCTTCGGG GTGCAGGGCC TCGATGGCGA CACGGGCAAC
GCCGGAAGCT GGCTGGCTGC CGCGGACCGG CGGCTCTACG AGGCGAAGGC GGCCGGCCGC
AACCGCTGCC ACGGCGGCTG A
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| Protein sequence | MMQDCEKLLD EPGRLAAVRR YAVLDTAPEE PFDKLTRLVC NVLEVPYAAV TLIDADRQWF
KSLVGLSGSE GPRHESFCTH TIKTRDPMIV PDATLDPRFR DSPLVTGAAG IRSYLGVPLE
TPDGYNLGAL CAVDTAPRTF STSQIEIMKS FASLVLDELE LRQIALSDAL TGAMTRRGWL
AAVEKEMARG ARQGTQAAIV LFDVDHFKAI NDTHGHAVGD AVLQALTRRC LLHLGPADAL
GRIGGEEFAV LVPDAGLPEA MELAERLRRS FSDAPIEVAG QALRVTASFG VQGLDGDTGN
AGSWLAAADR RLYEAKAAGR NRCHGG
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