| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3460 |
|---|
| Symbol | |
|---|
| ID | 3721746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 529593 |
|---|
| End bp | 530258 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640073127 |
|---|
| Product | ABC polar amino acid transporter, inner membrane subunit |
|---|
| Protein accession | YP_354965 |
|---|
| Protein GI | 77465462 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACT TCATCCGCCT GTTCTTCAAT CTCGAGGTCA TGGCCCAGAC GCTGCCGCTG
CTGATGCAGG GGCTCTGGAT GACGGTCAGG CTCTGTGCCG CCGTCATCGC CCTCGGCCTT
GTGGGCGGGC TCTTCCTCGC GCTCGGCGCC CTCTCGCACC GGCGCTGGCT GCGCTGGCCC
GCCTTCGCGG TGATCGATTT CCTGCGCGCG CTGCCGCCCT TGGTGCTCCT GATCTTCATC
TATTCGGGCC TGCCCTTCGC GGGGCTCGCC ATCTCGCCCT TCGCGGCGGT GGCGGTGGCC
TTCTTCCTCA ACAACTCGGC CTATTACGCC GAGATCTACC GCGCCGGCAT CCAGTCGGTG
CCCGCAGGCC AGACCGAGGC CGCGCGCGCC TGCGGGCTGA CCACCGGCCA GACGCTCGCC
CATGTGGTGC TGCCGCAGGC GGTGCGCAAC GTGCTGCCGG ATCTGCTGTC GAACACGGTC
GAGGTGGTCA AGCTCACCTC GCTCGCCTCG GTCGTGTCGC TGGCCGAACT TCTCTACTCG
GCCAACATGG CCCGGTCGCT CACCTACAAT GCCTCGCCGC TCGTGCTCGC GGCGCTGGTC
TATCTCGTGC TGCTCTGGCC GCTGGTGCGG CTCGTCAGCC GCTACCAGCG CCGCCTCGCG
GCCTGA
|
|---|
| Protein sequence | MQDFIRLFFN LEVMAQTLPL LMQGLWMTVR LCAAVIALGL VGGLFLALGA LSHRRWLRWP
AFAVIDFLRA LPPLVLLIFI YSGLPFAGLA ISPFAAVAVA FFLNNSAYYA EIYRAGIQSV
PAGQTEAARA CGLTTGQTLA HVVLPQAVRN VLPDLLSNTV EVVKLTSLAS VVSLAELLYS
ANMARSLTYN ASPLVLAALV YLVLLWPLVR LVSRYQRRLA A
|
|---|
| |