Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3371 |
Symbol | |
ID | 3722073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 435820 |
End bp | 436392 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640073038 |
Product | TRAP-T family transporter small inner membrane subunit |
Protein accession | YP_354876 |
Protein GI | 77465373 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.123148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCT TCATCCGTTT CGCCGACCGC CTGTCGGCGG CCTTCGGCCA TGCCTTCGGC TGGCTGGTGG TCCTCATGAC CCTCGGGGTC AGCTACGAAG TTCTCGTGCG CTACGCCTTC AATGCGCCGA CGCCCTGGTC GCTCGACGTG TCCTTCATCA TGTATGGCAC GCTCTTCATG ATGGGCGGCG CCTATACGCT GTCGCGCAAC GGCCATGTGC GCGGCGATTT CCTCTACCGG ATGTGGAAGC CCCGCACGCA GGCGGCGGTG GATCTGGTGC TCTACCTGAT CTTCTTCTTT CCCGGCATCA CGGCGCTGAT CCTTTCGGGC TGGAAATATT CCGCGCGGTC CTGGGGGTAT GCCGAAGTCA GCGTGAACAG CCCTGCGGGC ATCCCGATCT ATCAGTTCAA GTCGGTGATG GTGGCCGCGG GGCTCCTCCT CTTCATTCAG GGGCTGGCGC AGGTCTGCCG CTGCCTCCTC TGCCTGCGCG AGGGCTACTG GCTCTCGGCC GAGCAGGATG TCGAGGAGAC CGAGGCCGCG CTCGTGCGCG ACCATGGCGG GGAGGCGACA TGA
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Protein sequence | MRAFIRFADR LSAAFGHAFG WLVVLMTLGV SYEVLVRYAF NAPTPWSLDV SFIMYGTLFM MGGAYTLSRN GHVRGDFLYR MWKPRTQAAV DLVLYLIFFF PGITALILSG WKYSARSWGY AEVSVNSPAG IPIYQFKSVM VAAGLLLFIQ GLAQVCRCLL CLREGYWLSA EQDVEETEAA LVRDHGGEAT
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