| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3346 |
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| Symbol | |
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| ID | 3722047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 411146 |
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| End bp | 413872 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640073012 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_354851 |
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| Protein GI | 77465348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT ACCTTCGTCT CTCGGGCCTC GAGCCCTTCG TCCTCACGCC CGACATCCCC
TTCGTCAACG TGGGCGAGCG GACGAACGTC ACGGGCTCCG CTCGCTTCCG CAAGCTCATC
ACCAACCGCG ACTATGCGGC GGCGCTCGAG GTCGCGCGCG ATCAGGTGCA GAACGGCGCG
CAGATCCTCG ACGTGAACAT GGACGAGGGG CTGATCGACT CGAAGGCCGC CATGGTCGAA
TTCCTCAACC TGATCGCGTC CGAGCCCGAC ATCGCGCGGG TGCCGCTGAT GATCGACAGC
TCGAAATGGG AGGTGATCGA GGCCGGACTG AAATGCGTGC AGGGCAAGCC CGTGGTCAAT
TCGATCAGCC TGAAGGAGGG CGAGGAGTCG TTCCGGCGGC AGGCGGGCCT CTGCCTCGCC
TACGGGGCCG CGGTCGTGGT CATGGCCTTC GACGAGGAGG GGCAGGCCGA CAGTTTCGCC
CGCAAGACCA CGATCTGCGC CCGGGCCTAC CGCATCCTCG TCGAGGAGGT GGGCTTCCCG
CCCGAGGACA TCATCTTCGA CCCGAACGTC TTCGCCGTGG CCACGGGCAT CGAGGAGCAC
GACAATTACG GCGTCGACTT CATCGAGGCC GCGCGCTGGA TCCGGGCGAA CCTGCCCCAT
GCCCATGTCT CGGGCGGCGT GTCGAACCTC TCCTTCAGCT TCCGCGGCAA CGAGCCCGTG
CGCGAGGCGA TGCATGCGGT CTTCCTCTAC CATGCGATCC GGGCCGGGAT GGACATGGGG
ATCGTGAATG CGGGCCAGCT TGCGGTCTAC GACCAGATCG ATCCCGACCT GCGCGAGGCC
TGCGAGGATG TGGTGCTGAA CCGCAAGCCG AAGCAGGGCG GCACCGCGAC CGAGCGGCTC
TTGGCTCTGG CCGAGCGGTT CCGGGGCGGC GCGCGCGAGG AGAAGACGCG CGATCTGGCC
TGGCGCGGCT GGCCGGTCGA GAAGCGGCTC GAACATGCGC TGGTCAACGG CATCACCGAA
TTCATCGAGG CCGACACCGA AGAGGCCCGG CAGGCGGCCG AGCGGCCGCT CCATGTGATC
GAGGGCCCGC TGATGGCGGG GATGAACGTG GTGGGCGACC TCTTCGGCGC GGGAAAGATG
TTCCTGCCGC AGGTGGTGAA GTCGGCCCGG GTGATGAAGC AGGCCGTGGC CGTGCTCCTG
CCCTACATGG AGGAGGAGAA ACGTCTCGGC GGCGGCGAGG GCCGCGAGGC GGCGGGCAAG
GTGCTGATGG CCACGGTGAA GGGCGATGTG CATGACATCG GCAAGAACAT CGTGGGCGTG
GTTCTCGCCT GCAACAATTA CGAGATCATC GATCTGGGCG TGATGGTGCC GCCGGCGAAG
ATCCTCGAGG TGGCGCGGGC CGAGAAGGTG GATGCGATCG GCCTCTCGGG CCTCATCACG
CCCTCGCTCG ACGAGATGGT GACGGTGGCG GCCGAGATGG AACGGGAAGG GTTCGACATC
CCGCTGCTGA TCGGCGGGGC CACTACCTCG AAGGTGCATA CGGCGGTGAA GATCGCCCCC
TCCTATTGCA GGGGCCCCGC GGTCTATGTC ACCGATGCAA GCCGCGCGGT GGGGGTGGTG
GGCCAGCTTC TGAGCGCCGA GCGCAAGGGC GCCTATGTCG AGGGGCTGCG CGCCGACTAT
GCCGAGGTGG CCGAGCGCCA CGCCCGGTCG GAACGCGCCA AGCAGCGCCT GCCGCTGGCG
GCGGCGCGGG CCAATGCGCT GAAGCTCGAC TGGGCCGCGC ACCGGCCGGT GCGGCCGAGC
TTCACCGGCA GCCGGACCGT CGACGGCTGG GATCTGGCCG AGATCGCGCG CTACATCGAC
TGGACGATGT TCTTCCAGAC CTGGGAGTTG AAGGGGGTCT ATCCGCGCAT CCTCGAGGAT
CCGGCGCAGG GCGAGGCCGC CCGCGCGCTC TTTGCCGATG CGCAGGAGAT GCTCGCGCGC
ATCGTGGCGG AACGCTGGTT CACGCCGCGT GCGGTGGTGG GCTTCTGGCC CGCCAATGCG
GTGGGCGACG ACATCCGCCT CTATGCCGAC GAGACGCGGC AGGCCGAGCT CGCCACCTTC
TTCACCCTCC GCCAGCAGGT CACGAAGCGC GAAGGGCGGC CCAATCTCGC CCTGTCGGAT
TTCGTGGCGC CCGAAGGCGC GGGGCCCGAC TGGGTCGGCG GGTTCGTGGT GACGGCCGGC
CCCGAGGAGG CCTCCATCGC CGAGCGGTTC GACCGGGCGA ACGACAATTA CTCCGCCATC
ATGGTCAAGG CGCTGGCCGA CCGCTTCGCC GAGGCCATGG CCGAGAGGCT GCACGAGAGG
GTGCGCCGCG AGCTCTGGGG CTACGCCCCT GACGAGTCCT TCACGCCCGA TGCGCTTCAT
GCCGAGCCCT ACCGCGGCAT CCGGCCCGCG CCGGGCTACC CGGCCCAGCC CGACCATACC
GAGAAGGTCA CGCTCTTCCG CCTGCTCGAC GCGACCGCGG CCACGGGGGT GGAACTGACC
GAGAGCATGG CCATGTGGCC GGGCTCGTCG GTCTCTGGCC TCTATATCGG CCATCCCGAC
GCCTATTACT TCGGCCTCGC GCGGGTCGAG CGCGATCAGG CCGAGGATTA TGCCCGTCGC
AAGGGCATGG AACTGGCCGA GGTCGAGCGC TGGCTCGCCC CGGTCATGGC GGGCCGGGTC
GACACACCCT CTTCGCGGGC CGCCTGA
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| Protein sequence | MTRYLRLSGL EPFVLTPDIP FVNVGERTNV TGSARFRKLI TNRDYAAALE VARDQVQNGA
QILDVNMDEG LIDSKAAMVE FLNLIASEPD IARVPLMIDS SKWEVIEAGL KCVQGKPVVN
SISLKEGEES FRRQAGLCLA YGAAVVVMAF DEEGQADSFA RKTTICARAY RILVEEVGFP
PEDIIFDPNV FAVATGIEEH DNYGVDFIEA ARWIRANLPH AHVSGGVSNL SFSFRGNEPV
REAMHAVFLY HAIRAGMDMG IVNAGQLAVY DQIDPDLREA CEDVVLNRKP KQGGTATERL
LALAERFRGG AREEKTRDLA WRGWPVEKRL EHALVNGITE FIEADTEEAR QAAERPLHVI
EGPLMAGMNV VGDLFGAGKM FLPQVVKSAR VMKQAVAVLL PYMEEEKRLG GGEGREAAGK
VLMATVKGDV HDIGKNIVGV VLACNNYEII DLGVMVPPAK ILEVARAEKV DAIGLSGLIT
PSLDEMVTVA AEMEREGFDI PLLIGGATTS KVHTAVKIAP SYCRGPAVYV TDASRAVGVV
GQLLSAERKG AYVEGLRADY AEVAERHARS ERAKQRLPLA AARANALKLD WAAHRPVRPS
FTGSRTVDGW DLAEIARYID WTMFFQTWEL KGVYPRILED PAQGEAARAL FADAQEMLAR
IVAERWFTPR AVVGFWPANA VGDDIRLYAD ETRQAELATF FTLRQQVTKR EGRPNLALSD
FVAPEGAGPD WVGGFVVTAG PEEASIAERF DRANDNYSAI MVKALADRFA EAMAERLHER
VRRELWGYAP DESFTPDALH AEPYRGIRPA PGYPAQPDHT EKVTLFRLLD ATAATGVELT
ESMAMWPGSS VSGLYIGHPD AYYFGLARVE RDQAEDYARR KGMELAEVER WLAPVMAGRV
DTPSSRAA
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