Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3248 |
Symbol | |
ID | 3721850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 304951 |
End bp | 306462 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640072918 |
Product | ABC peptide transporter, periplasmic binding protein |
Protein accession | YP_354758 |
Protein GI | 77465255 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.336639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGAA AATGGGCCCG CGTCGGCCTC ATCGCGCTGA GCGTGACCCT CGGCCTCGGC AGCATCGCCG AAGCCGCGGG CGTGCTGACC ATCGGCCGGC GCGAGGACGG CACCACCTTC GACCCGATCG CCACGGCGCA GAACGTGGAT TTCTGGGTCT TCTCGAACGT CTATGACGTG CTCGTGCGCG TGGACAAGAC CGGGACCAAG CTCGAGCCCG GTCTGGCCGA AAGCTGGGAG ATCTCGGAGG ACGGGCTCAC CTACACGTTC CATCTGCGCG ACGCGAACTT CTCCGACGGC TCGCCCATCA CCGCCGAGGA CGCGGCCTTC ACGCTGCTGC GCATCCGCGA CAGCGAACTG TCGCTCTGGT CGGACAGCTA TGCGGTGATC GAAACTGCCG AGGCGACCGA TCCGAAGACC CTCGTCGTCA AGCTGAAGAC CCCCTCGGCG CCCTTCCTGT CCACCATGGC GATGCCCGCC GTCTCGATCC TGTCGAAGGC GGGCGTCGAA GCCATGGGCG AGGAGGCCTA TGCCGAGAAG CCCGTGGCCT CGGGCGCCTT TACCGTCAAG GAATGGCGCC GCGGCGACCG GGTGATCCTG AAGAAGAACC CGGAATTCTG GCAAGCCGAC CGGGTGAGCC TCGACGGGGT CGAATGGATC TCGATCCCCG ACGACAACAG CCGGATGCTG AGCGTGCAGG CGGGCGAACT CGACGCCGCG ATCTTCGTGC CCTTCTCGCG GGTGGCGGAA CTGAAGAAGG ATACCAACCT CAAGGTCATG GTCGAGCCCT CGACGCGCGA GGACCATCTG CTCCTCAACC ACGAGCACGA GCCACTGAAC GATCCCAAGG TGCGCGAGGC GATCGATCTC GCCATCGACA AGCAGGCGAT CGTCGACACG GTGACCTTCG GGCAGGCGCA GATCGCCAAT TCCTACATCC CCGCCGGCGC GCTCTATCAC AACGACAACA ACCTGCTGCG GCCCCACGAC CCCGAGAAGG CCAAGGCGCT TCTGGCCGAG GCGGGTGTGT CCGACGTGAG CCTCGATTAT GTGGTGAATG CGGGCAACGA GGTGGACGAG CAGATCGCCG TCCTCCTCCA GCAGCAGCTG GGTCAGGCCG GGATCACGGT CAATCTGCAG AAGATGGACC CAAGCATGAC CTGGGACATG CTGGTGAATG GCGAATACGA CCTGTCGGTC ATGTATTGGA CGAACGACAT CCTCGATCCC GACCAGAAGA CCACCTTCGT TCTGGGTCAC GACGTCAACA TGAACTACAT GACGCGCTAC GAAAACGACA CGGTGAAGCA GCTCGTGGCC GATGCCCGGC TCGAGATGGA CCCGGCCAAG CGCGAGGCGA TGTATACCGA GATCCAGGAA CTGTCGAAGG CCGATACCCA CTGGATCGAC CTCTATTACA GCCCCTTCAT CAACGTGACG CGTGCCAATA TCGAGAACTT CAACCAGAAC CCGCTGGGCC GCTTCTTCCT CGAGGATACG GTGAAGAACT GA
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Protein sequence | MTGKWARVGL IALSVTLGLG SIAEAAGVLT IGRREDGTTF DPIATAQNVD FWVFSNVYDV LVRVDKTGTK LEPGLAESWE ISEDGLTYTF HLRDANFSDG SPITAEDAAF TLLRIRDSEL SLWSDSYAVI ETAEATDPKT LVVKLKTPSA PFLSTMAMPA VSILSKAGVE AMGEEAYAEK PVASGAFTVK EWRRGDRVIL KKNPEFWQAD RVSLDGVEWI SIPDDNSRML SVQAGELDAA IFVPFSRVAE LKKDTNLKVM VEPSTREDHL LLNHEHEPLN DPKVREAIDL AIDKQAIVDT VTFGQAQIAN SYIPAGALYH NDNNLLRPHD PEKAKALLAE AGVSDVSLDY VVNAGNEVDE QIAVLLQQQL GQAGITVNLQ KMDPSMTWDM LVNGEYDLSV MYWTNDILDP DQKTTFVLGH DVNMNYMTRY ENDTVKQLVA DARLEMDPAK REAMYTEIQE LSKADTHWID LYYSPFINVT RANIENFNQN PLGRFFLEDT VKN
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