| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3040 |
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| Symbol | |
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| ID | 3721625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 74227 |
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| End bp | 75384 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640072715 |
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| Product | ABC permidine/putrescine transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_354556 |
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| Protein GI | 77465053 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.276128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGC ACCGTGACCA CATCCCGGCG AAAGAGTTTC TTCAGCGGCT GGAAAGCTAC
CGCAAGGGCT CGATCTCGCG CCGGCACTTC CTGAACGTGA CCGGCCTCGG CGCCGCGACC
ATGGCGATGG CGGGTGCGAT GCCGGGCTTC GCCCGCCGCG CGCAGGCCCA GGGCGCGATC
GGCGACCGCG TCGTGATCGC CACCTGGCCG AACTACCACG ACCCGGCCGA CCTCGACGCC
TTCCGGGCCG CCACCGGCGC CGCGGTCGAC GTCAACGTCT TCGGCTCCAA CGAGGAGATG
CTCGCGAAGC TGCAGGCGGG CGGCACGGGT TGGGACGTGG TGGTGGCCAC GAACTACACG
ATCTCGACCT ATGTCGAGGC GGGGATCATC GAGGAGCTCG ACCTGTCGCG CATCCCGAAT
TTCGACAGGG CTTCGACCGA CCCGCGCTTC GCCGATCCGG GCGTCATCGA CGGCAAGACC
TACGCCATCC CGCGCAACAT CGGCACGACC GGCTATTGCA TCAACACCGC CGAGATCGAC
GGCGAGACGC CGACCACCTG GAAGGAATTC TGGGATCTGG CGCGCGACCG GCTGTCGGGC
CGCGGCATAG TGCATGACTA TCAGCTGACC GCCATCGGCA ACGCACTGAA ATACTACGGC
TATTCCTTCA ACTCGGTCGA TCCGGCGGAA CTCGCGAAGG CGGAGGAGCT GCTGATCGAC
GCCAAGCCGC ATCTCTTCGC GATCACCTCG GATTACCAGC CCTCGATGCG TTCCGGCGAT
GCGGCTCTGT CGATGTGCTG GACCGGCGAC GCGGTGCAGC TTCAGCGCGA CATCCCCGAG
ATTGCCTATG TGCTCGGCCG CGAGGGCGGC GAGCTCTGGT CGGACTTCTT CACCATCCCC
GCCTCGGCCC CGCACAAGGA TGCGGCCTAT GCGCTGATCA ACTTCCTGCT CGAGCCGAAG
ATGGCCGCGC AGGAGGCCAT GTTCCACGGC TATCCGACCG GAGACGCCCG GGTCGACGCG
ATGCTGCCCG CCGAGATGCG CGACAGCCCG ATCCTGTTCC CGGCTGCGGA TCTCCTGAAT
GCGCTCGAGT TCGGCGCCGC CGTCACCCTG ACCAACCCGG AACGCGCCGA GGTCATGGCG
CGCTTCAAAT CGGCGTAA
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| Protein sequence | MTQHRDHIPA KEFLQRLESY RKGSISRRHF LNVTGLGAAT MAMAGAMPGF ARRAQAQGAI
GDRVVIATWP NYHDPADLDA FRAATGAAVD VNVFGSNEEM LAKLQAGGTG WDVVVATNYT
ISTYVEAGII EELDLSRIPN FDRASTDPRF ADPGVIDGKT YAIPRNIGTT GYCINTAEID
GETPTTWKEF WDLARDRLSG RGIVHDYQLT AIGNALKYYG YSFNSVDPAE LAKAEELLID
AKPHLFAITS DYQPSMRSGD AALSMCWTGD AVQLQRDIPE IAYVLGREGG ELWSDFFTIP
ASAPHKDAAY ALINFLLEPK MAAQEAMFHG YPTGDARVDA MLPAEMRDSP ILFPAADLLN
ALEFGAAVTL TNPERAEVMA RFKSA
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