| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2450 |
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| Symbol | |
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| ID | 3720046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1088290 |
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| End bp | 1090068 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640070630 |
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| Product | putative Alpha-amylase |
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| Protein accession | YP_352511 |
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| Protein GI | 77463007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT GGGCCTGGGG ACCGCGGATC GAGGATGGCC TCGGCCGCTT CCGGCTCTGG
GCGCCGTCGC AGGAGCGGCT GGTGCTGAGA CTAGACGGAA CGGATCACCC GATGACACGC
AGCGACGACG CGTGGTTCGA GGTGCAGGTG CCCGCAGAGG CGGGCATGGA CTATGGCTTC
GTCCTGGAGA GCGGGCAGGT GGTGCCCGAT CCGGCGGCAC GGGCGCAGGC GGGCGATGTG
CACGGCCTGT CGCGTCTGGT CGCGCCGTCC TTTGACTGGC GGCACGACTG GACGGGGCGG
CCCTGGGCCG AGACCGTGGT GATGGAGCTG CATATCGGCA CCTTCACCGA GGAAGGCACC
TTCCGAGCCG CCATCGAGCA TCTGCCGCAT CTGGCCGAAA TCGGGATCAC GATGATCGAG
CTGATGCCCG TGGCGCAGTT CGGCGGCAAC CGCGGCTGGG GCTACGACGG GGTGCTGCTC
TACGCGCCCC ATCCCGCCTA TGGCACGCCC GAGGATCTGA AGGCTCTGGT CGACGCGGCC
CACGGCCTCG GCATGAGCGT GGTGCTCGAT GTGGTCTACA ACCATTTCGG ACCGGACGGG
AATTACCTCG GGGCCTATGC CGCGGACTTC TTCGACCCGG AACGGCACAC GCCCTGGGGC
AGCGCCATCG CCTATCACCT GCCGCCCGTG CGCCGCTTCT TCCTCGACAA TGCGCTCTAC
TGGCTGACCG AGTTCCGCTT CGACGGGCTG CGCATCGACG CGGCCGACCA TATCCGCGAT
CCGGACTCGG ACCCCGAGGT GCTGGTGGAT CTGGCGCGCG CCATCCGGAA GCGCATCCCC
GACCGGCCGA TCCATCTGAC CACCGAGGAC AACCGCAACA TCACGCGGCT GCACGAGCGG
GGACCCGAGG GCGAGGTGGT GCTGCACACG GCCGAATGGA ACGACGACCT GCACAATGTG
GCCCATGTTC TGCTGACCGG CGAGACCGAG GGCTATTACT GCGACTTCGT GAAGGACCAC
TGGCGCAAAT ATGCCCGCGC GCTGGCCGAG GGCTTCGTCT ATCAGGGCGA GCATTCCGAG
CATGAGGGCG CGCCCCGCGG CACGCCGTCG GGCCACCTGC CGCCGCTCGC CTTCGTCGAT
TTCCTCCAGA ACCACGACCA GATCGGCAAC CGCGCCTTCG GCGAGCGGCT GACGACGCTC
GCGCCCGAGG CGCGGCTGCG CGCGATGATG GCGGTCCTGC TGCTGTCGCC GCATGTGCCG
CTGCTCTTCA TGGGCGAGGA ATGGGGCGAG ACGCGGCCCT TCACCTTCTT CACCGACTTT
CACGGAGAGC TCGCCGATGC CGTCCGCAAC GGGCGGCGCA AGGAGTTCGC GCATTTCTCC
GCCTTCCAGG GGCTGGATCT CGACCGGACG GTGCCCGATC CGAATGCCGA GGGCACGTTC
CTCTCCTCGA AGCTCGACTG GCTGCACCGC GAGACCGAGC GCGGCCGGTC CTGGATGGCC
TTCGTCAAGG ATCTGCTCGC CGCCCGTGCC CGCGAGATCG CGCCGCGGCT CGAGCGCGCA
CCCGGAAACG GCGGGCGCAT CGTGGCGGTC TCGGACGATC TGGTGGCGGT CGACTGGCAG
CTCGACGGGG CGGTCCTGCG TCTCCGCGTC AATTTCGACG ACCGGCCGCA GGACTTGCCG
GAGGCCGGGG GCCGTGTGAT CCATGCCTCT CCCGGCACCG AGGCCGGCGG TCCGCTGCCG
CCCTGTTCGG TGCTGGTCAC GCTCGAGGAG ACCGCATGA
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| Protein sequence | MNDWAWGPRI EDGLGRFRLW APSQERLVLR LDGTDHPMTR SDDAWFEVQV PAEAGMDYGF
VLESGQVVPD PAARAQAGDV HGLSRLVAPS FDWRHDWTGR PWAETVVMEL HIGTFTEEGT
FRAAIEHLPH LAEIGITMIE LMPVAQFGGN RGWGYDGVLL YAPHPAYGTP EDLKALVDAA
HGLGMSVVLD VVYNHFGPDG NYLGAYAADF FDPERHTPWG SAIAYHLPPV RRFFLDNALY
WLTEFRFDGL RIDAADHIRD PDSDPEVLVD LARAIRKRIP DRPIHLTTED NRNITRLHER
GPEGEVVLHT AEWNDDLHNV AHVLLTGETE GYYCDFVKDH WRKYARALAE GFVYQGEHSE
HEGAPRGTPS GHLPPLAFVD FLQNHDQIGN RAFGERLTTL APEARLRAMM AVLLLSPHVP
LLFMGEEWGE TRPFTFFTDF HGELADAVRN GRRKEFAHFS AFQGLDLDRT VPDPNAEGTF
LSSKLDWLHR ETERGRSWMA FVKDLLAARA REIAPRLERA PGNGGRIVAV SDDLVAVDWQ
LDGAVLRLRV NFDDRPQDLP EAGGRVIHAS PGTEAGGPLP PCSVLVTLEE TA
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