| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2410 |
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| Symbol | rpoH1 |
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| ID | 3720007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1039301 |
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| End bp | 1040197 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640070591 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_352472 |
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| Protein GI | 77462968 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACTT ACACCAGCCT TCCCGCTCCG AGTCCCGAAC AGGGCCTCAA CCGCTACATG
CAGGAAATCC GCAAGTTCCC CCTGCTGGAG CCCGAAGAGG AATACATGCT GGCCAAGCGC
TGGGTCGACC ATCAGGACAA TCGGGCCGCG CACAAGCTGG TCACCTCGCA CCTGCGCCTC
GCGGCCAAGA TCGCCATGGG CTACCGGGGC TACGGCCTGC CGCAGGCCGA GGTGATCTCC
GAGGCGAACG TGGGCCTGAT GCAGGCGGTG AAGCGCTTCG ACCCCGAGAA GGGCTTCCGG
CTGGCCACCT ATGCGATGTG GTGGATCCGC GCCTCGATCC AGGAATATAT CCTGCGGTCC
TGGAGCCTCG TGAAGCTCGG CACCACCTCG GCGCAGAAGA AGCTGTTCTT CAACCTGCGC
AAGGCCAAGG CCAAGCTCGG CGCGCTCGAG GAGGGCGACC TGCGGCCCGA GAACGTGGCC
CAGATCGCCA AGGATCTCGG CGTGTCCGAG ACCGAGGTCA TCGACATGAA CCGCCGCCTG
TCGGGGTCGG ACGCGTCGCT GAACGCGACC ATCGGCTCGG ACGGCGAGGG CTCGACCCAG
TGGCAGGACT GGCTCGAGGA TGAAGACAGC GACCAGGCGG CGGATTATGC CGAGCGCGAC
GAGCTCGAGA TCCGGCGCGA GCTTCTGGCG CAGTCGATGT CGGTCCTGAA CGACCGCGAG
AAGGACATTC TCGTGCAGCG CCGCCTGACC GACGATCCGG TGACGCTCGA GGAGCTGTCC
GAGGGCTACG GCGTCAGCCG CGAGCGGATC CGCCAGATCG AGGTCCGCGC CTTCGAGAAG
CTTCAGGCCA AGATGCGCGA GCTGGCGCGG TCGAAGGGCA TGACGATCCC CGCCTGA
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| Protein sequence | MSTYTSLPAP SPEQGLNRYM QEIRKFPLLE PEEEYMLAKR WVDHQDNRAA HKLVTSHLRL
AAKIAMGYRG YGLPQAEVIS EANVGLMQAV KRFDPEKGFR LATYAMWWIR ASIQEYILRS
WSLVKLGTTS AQKKLFFNLR KAKAKLGALE EGDLRPENVA QIAKDLGVSE TEVIDMNRRL
SGSDASLNAT IGSDGEGSTQ WQDWLEDEDS DQAADYAERD ELEIRRELLA QSMSVLNDRE
KDILVQRRLT DDPVTLEELS EGYGVSRERI RQIEVRAFEK LQAKMRELAR SKGMTIPA
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