Gene RSP_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_2399 
Symbol 
ID3719996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp1026870 
End bp1027763 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content66% 
IMG OID640070580 
ProductABC putrescine transporter, inner membrane subunit 
Protein accessionYP_352461 
Protein GI77462957 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGCAA AGACCAAGCG CGCGCGGACG GGCTGGCTTC TGTCGGCCCC GGCCCTCGTG 
ATCCTCCTCC TTGCCGCGTC GGGGCCGCTG CTGGTGGTGC TGGTCTACAG CTTTCTCGTG
AAGGGCCAGT ATGGCGGCGT GATCTGGACC TTCTCGACCG AGGCCTGGTT CGAGGTGCTC
TTCACCCGCG ACATCTTCTC GGACGAAGTG ACGCTCGCCG ACGCCCACCT CGCGATCTTC
TGGCGCTCGG TGAAACTGTC CCTGATGACG ACGGCCATCA CCTTCGCCGT GGGCTTTCCC
ACCGCCTGGT TCATCGCGAC CCGGCCGCCG AACCGGCGGG CGCTCTGGCT CTTCCTCATC
ACCATCCCGT TCTGGACCAA CCTGCTGATC CGCACCTTCG CCATCAACGA GGTGATCCGC
AACGAGGGCA TCCTGAACAC GCTGATGATC CGTGCGGGCC TGATCGAGCG GCCGATCCAG
ATCCTCTATA CCGACACGGC GGTGCTGATC GGGATGGCCT ATGTCTACCT GCCGCTCATG
GTGCTGCCGC TCTTCGCCGC GATCGACCGG TTCGACATGC GACTGCTCGA GGCGGCTTAC
GACCTCTATG CGAGCCGCTG GCAGGTGCTG CGGCGGATCA TCCTGCCGCT GGTGAAGCCC
GGGATCGTCG CGGGCTCGAT CCTCGTCTTC GTCCCCTCGC TCGGCGCCTA TGTCACGCCG
CGGGTGCTGG GCGGCGGCAA GAACATGATG ATCGGCAATT TCATCGAGCT GCAGTTCGGA
CAGGGCCGCA ACTGGCCGCT CGGCGCCGCG CTCTCGATGC TGCTTCTGGC CATCGTGATG
GTGGCGCTTC TGGTCTATGT CCGCGCCGCG GGCCGGGGGA CCGGCCATGG GTAA
 
Protein sequence
MGAKTKRART GWLLSAPALV ILLLAASGPL LVVLVYSFLV KGQYGGVIWT FSTEAWFEVL 
FTRDIFSDEV TLADAHLAIF WRSVKLSLMT TAITFAVGFP TAWFIATRPP NRRALWLFLI
TIPFWTNLLI RTFAINEVIR NEGILNTLMI RAGLIERPIQ ILYTDTAVLI GMAYVYLPLM
VLPLFAAIDR FDMRLLEAAY DLYASRWQVL RRIILPLVKP GIVAGSILVF VPSLGAYVTP
RVLGGGKNMM IGNFIELQFG QGRNWPLGAA LSMLLLAIVM VALLVYVRAA GRGTGHG