| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2394 |
|---|
| Symbol | kdtA |
|---|
| ID | 3719991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1021231 |
|---|
| End bp | 1022454 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640070575 |
|---|
| Product | putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) |
|---|
| Protein accession | YP_352456 |
|---|
| Protein GI | 77462952 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCT ACCGCCTCCT TCTCCGCCTC CTGCTGCCCG GCCTCGTTCT GGGCGTCCTC
CTCCGCCGCC TGCGCGGCCG GGGCGTCGCG CACGAGCTGA GGGAGCGGCT GGCTCTGGAT
CCGGGTGCAG GCCGCCCGAT CTGGCTGCAT GGCGCGAGCA ACGGCGAGAT CACCTCCGCG
CGCTGGCTGC TCGAGGAACT GCTGGCGCGC GATCCGTCCG CAAGCCTGAT CGTCACCTGC
AACAATCCCA CGGCGCGGAC GATGGTCCGA AGCTGGGGCC TGCCCCGCAC CGACGCCCGC
CTCGCGCCCT GGGACAGCCC GGGCGCTGTC CACCGCTTCC TCACCCACTG GCGGCCGCGG
GCCCTCCTTC TCCTCGAGAA CGAGCTCTGG CCCGAGCGGC TCGCCGGATG CGCCGCCCGC
GGCATCCCGG TGCTCGCCAT CGGCGCGCGC CTGTCGGAAA GCTCGGCGCG GCGCTGGGGA
AGGGTTGCGC CCGGGCTCCT GCGGCAGATG CTCGGCGCGA TCGGCTGGCT CTCGGCGCAG
GACGCGGCCT CCGAGCGGCG CTTCGTCGCG GCGGGCCTTT CGCCGGAGCG TCTCGGCCCG
CGGCTCCTCC TGAAGGCGGG CGTGCGCCCC GCCCTGCCCG CGACGCCCCC CTTTCCCGCG
CCGCCGCGGG CACGCTGCCT GCTCGCGGCC TCGACCCACG AGGGCGAGGA GGCCGCGGTG
CTGCAGGCCT TCCGCAGCGC CCGCGACCTC TTCGACCTTC TGGTGATCGC GCCCCGTCAT
CCGCAGCGCG GCCCCGAGAT TCTGGCCCTG GCCCGGACTG AAGGGATCGA CGCCCGCCTC
CGCTCGCGCG GAGACACGCC CGACGCGCCG ATCTATGTCG CGGACACGCT GGGCGAGATG
GGGCTCTGGT ACGGGCTCTG CGGCGCGACC TTCATCGGCG GCACACTCGC GCCGCGCGGC
GGCCATACGC CGTTCGAGCC GATGGAGGCG GGATCGGCGC TGGTCCACGG TCCCTCGATC
CACAATTTCG CCGAGGTCTT CGCAGCGCTC GACGCGGCCG GCGCCGCCCT GCCCGTGAGC
TCGGCCGAAG ATCTGGGCGC GGCGCTGGCC CGGCTCACGC CCGAGCGCCA ACAGGCGCTC
ATAGCCGCCG CCCACGCCCA GCCGCGCGCC ACGGATCCCA CCCCCATTCT CGCAGCGCTC
GACCGGCTCA CCCGCCCCGC CTGA
|
|---|
| Protein sequence | MTLYRLLLRL LLPGLVLGVL LRRLRGRGVA HELRERLALD PGAGRPIWLH GASNGEITSA
RWLLEELLAR DPSASLIVTC NNPTARTMVR SWGLPRTDAR LAPWDSPGAV HRFLTHWRPR
ALLLLENELW PERLAGCAAR GIPVLAIGAR LSESSARRWG RVAPGLLRQM LGAIGWLSAQ
DAASERRFVA AGLSPERLGP RLLLKAGVRP ALPATPPFPA PPRARCLLAA STHEGEEAAV
LQAFRSARDL FDLLVIAPRH PQRGPEILAL ARTEGIDARL RSRGDTPDAP IYVADTLGEM
GLWYGLCGAT FIGGTLAPRG GHTPFEPMEA GSALVHGPSI HNFAEVFAAL DAAGAALPVS
SAEDLGAALA RLTPERQQAL IAAAHAQPRA TDPTPILAAL DRLTRPA
|
|---|
| |