| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2195 |
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| Symbol | gcvP |
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| ID | 3719724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 806327 |
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| End bp | 809197 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640070367 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_352251 |
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| Protein GI | 77462747 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCA CCCCCACGGA CTATAACGCC TACGATTTCG CCAACCGCCG GCACATCGGC
CCATCGCCCT CCGAAATGGA AGAGATGCTG CGCGTGGTGG GGGTGTCCTC GCTCGACCAG
CTGATCGAGG AGACGGTGCC CGCCTCGATC CGGCAGGAGA CGCCGCTCGA CTGGGCGCCG
CTCGCCGAGC ATGAGCTGCT CGCCCGGATG CGCGAGGTGG CTGCCAAGAA CCGCGTGATG
ACCTCGCTCA TCGGGCAGGG CTATTACGGC ACGGTCACGC CGCCTGCCAT CCAGCGCAAC
ATCCTCGAGA ATCCGGCCTG GTACACGGCC TATACGCCCT ACCAGCCCGA GATCGCGCAG
GGGCGGCTCG AGGCGCTCTT GAACTACCAG ACCATGGTCG CGGACCTCAC CGGCCTGCCG
GTCGCCAATG CCTCGCTTCT CGACGAGGCG ACGGCGGCGG CCGAGGCCAT GACCATGGCC
GAGCGGGCCT CGAAGTCGAA GGCGCGGGCC TTCTTCGTCG ATGCCGACTG CCATCCGCAG
ACGATCTCGG TCATCCGCAC CCGCGCCGAG CCGCTGGGCA TCGAGGTGAT CGTGGGCCAT
CCCGCGCAGC TCGTGCCCGA GGATGTGTTC GGCGCGCTGT TCCAGTATCC CGGCACTTAC
GGGCTCGTGC GCGACTTCAC CCGCGATATT GCGGCGCTGC ACGAGGCGAA GGCGCTGGCC
GTGGTGGCGA CCGACCTTCT GGCGCTCTGC CTCCTCAAGG AGCCGGGCGC GATGGGCGCC
GACATCGCCA TCGGCTCGAG CCAGCGGTTC GGCGTGCCGA TGGGCTACGG CGGTCCGCAT
GCGGCCTTCA TGTCCTGCAA GGACGATCTG AAACGGTCGA TGCCCGGCCG GCTCGTCGGC
GTTTCGGTCG ATGCGCGCGG CAACAAGGCC TATCGCCTCG CCCTCCAGAC CCGCGAGCAG
CATATCCGCC GCGAGAAGGC CACCTCGAAC GTCTGCACCG CGCAGGCGCT TCTGGCGGTC
ATGGCGAGCT TCTATGCCGT CTTCCACGGC CCCCGCGGCC TCCGCGCCAT CGCCGAGCGG
GTGCATCTGA ACACCGTCCG CCTCGCGACC GCGCTGAAGG AGGCGGGAGC CCGCGTCAGC
CCCGAGGCCT TCTTCGACAC GATCACCGTC GAGGTGGGCG TGGGGCAGGC GGGGATCCTC
GCCGCTGCGC GTCACCGGGG CATCAACCTG CGCAAGGTGG GCCGCGACCG GGTGGGGATC
TCGCTCGACG AGACGACCGA TGCCGGCGTG ATCGCGCGCG TGCTCGATGC CTTCGGGATC
CACGAGCCCG CCCCCGCGAA GGTGGGCTTG GGCTTCCCCG AGCCGCTCCT GCGCGAGACC
GGCTATCTCT CGCATCCGGT CTTCCAGATG AACCGGGCGG AATCCGAGAT GATGCGCTAC
ATGCGCCGCC TTTCGGACCG CGACCTCGCG CTGGACCGGG CGATGATCCC GCTTGGCTCC
TGCACGATGA AGCTGAATGC CGCCGCCGAG ATGATGCCCA TCACCTGGCC CGAATTCGGC
ACGCTGCATC CGTTCGCGCC GGCCGATCAG GCCGCGGGCT ATCACGAGGC CATCGGCGAT
CTGGCCCAGC GGCTCTGCCG GATCACCGGC TACGACGCCA TGTCGATGCA GCCGAACTCG
GGCGCGCAGG GCGAATATGC GGGGCTTCTC ACCATCCTCG CCTATCACCG GGCGCGGGGC
GACGCGGAGC GCACGATCTG CCTCATCCCG GTCTCGGCGC ATGGCACCAA CCCGGCCTCG
GCGCAGATGG CAGGGATGAA GGTGGTCGTG GTGAAGTCGG CGCCGAACGG CGACGTCGAT
CTCGAGGATT TTCGCGACAA GGCGGCGGCG GCGGGCGACC GGCTCGCGGC CTGCATGATC
ACCTATCCCT CGACCCACGG CGTCTTCGAG GAGACGGTGC GCGAGGTCTG CCGCATCACC
CACGAGCACG GCGGTCAGGT CTATATCGAC GGGGCCAACA TGAACGCGAT GGTGGGCCTC
GTGCAGCCGG GCGCCATCGG CGGCGATGTG AGCCACCTGA ACCTGCACAA GACCTTCGCC
ATTCCGCATG GCGGCGGCGG CCCCGGCATG GGGCCCATCG GGGTCAAGGC GCATCTCGCG
CCGTACCTGC CGGGCCATCC CGAGGTGACG GGGCCGCTGA CCGGAGGCCA TGACGAGGCG
GCCGACGAGG GGCCGGTCTC GGCCGCGCCC TATGGCTCGG CCTCGATCCT GCTCATCTCC
TGGGCCTATT GCCTGATGAT GGGCGGCGAG GGGCTCACGC AGGCGACGCG GGTCGCGATC
CTGAACGCAA ACTATATCGC GGCGCGGTTG CGCGGGGCCT ACAAGGTGCT GTTCATGGGC
AATCGCGGGC GCGTGGCCCA CGAGTGCATC CTCGACACCC GGCCCTTCGC CGAGGCGGGC
GTGACGGTGG ACGATATCGC CAAGCGGCTG ATCGACAACG GCTTCCACGC GCCGACCATG
AGCTGGCCCG TGCCGGGGAC GCTGATGGTC GAGCCCACGG AATCCGAGAC CAAGGCCGAG
ATCGACCGGT TCGTGGCGGC GCTCCTGGCG ATCCGCGAGG AGATCCGCGC GGTCGAGGAG
GGCGAGATCG CCGCGGCGGA CAGCCCGCTG CGCCATGCGC CGCATACGGT CGAGGATCTG
GTGGCGGACT GGGATCGCAA ATATCCGCGC GAGCAGGGCT GCTTCCCGCC GGGCTCGTTC
CGGGTCGACA AATACTGGCC GCCCGTCGGC CGCGTCGACA ATGCGTGGGG CGACCGCAAC
CTCGTCTGCA CCTGTCCGCC GGTGGAAAGC TACAGCATCG CCGCACAATA G
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| Protein sequence | MSFTPTDYNA YDFANRRHIG PSPSEMEEML RVVGVSSLDQ LIEETVPASI RQETPLDWAP
LAEHELLARM REVAAKNRVM TSLIGQGYYG TVTPPAIQRN ILENPAWYTA YTPYQPEIAQ
GRLEALLNYQ TMVADLTGLP VANASLLDEA TAAAEAMTMA ERASKSKARA FFVDADCHPQ
TISVIRTRAE PLGIEVIVGH PAQLVPEDVF GALFQYPGTY GLVRDFTRDI AALHEAKALA
VVATDLLALC LLKEPGAMGA DIAIGSSQRF GVPMGYGGPH AAFMSCKDDL KRSMPGRLVG
VSVDARGNKA YRLALQTREQ HIRREKATSN VCTAQALLAV MASFYAVFHG PRGLRAIAER
VHLNTVRLAT ALKEAGARVS PEAFFDTITV EVGVGQAGIL AAARHRGINL RKVGRDRVGI
SLDETTDAGV IARVLDAFGI HEPAPAKVGL GFPEPLLRET GYLSHPVFQM NRAESEMMRY
MRRLSDRDLA LDRAMIPLGS CTMKLNAAAE MMPITWPEFG TLHPFAPADQ AAGYHEAIGD
LAQRLCRITG YDAMSMQPNS GAQGEYAGLL TILAYHRARG DAERTICLIP VSAHGTNPAS
AQMAGMKVVV VKSAPNGDVD LEDFRDKAAA AGDRLAACMI TYPSTHGVFE ETVREVCRIT
HEHGGQVYID GANMNAMVGL VQPGAIGGDV SHLNLHKTFA IPHGGGGPGM GPIGVKAHLA
PYLPGHPEVT GPLTGGHDEA ADEGPVSAAP YGSASILLIS WAYCLMMGGE GLTQATRVAI
LNANYIAARL RGAYKVLFMG NRGRVAHECI LDTRPFAEAG VTVDDIAKRL IDNGFHAPTM
SWPVPGTLMV EPTESETKAE IDRFVAALLA IREEIRAVEE GEIAAADSPL RHAPHTVEDL
VADWDRKYPR EQGCFPPGSF RVDKYWPPVG RVDNAWGDRN LVCTCPPVES YSIAAQ
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