Gene RSP_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_2181 
SymbolproX 
ID3719651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp787065 
End bp787991 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content65% 
IMG OID640070350 
ProductABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit 
Protein accessionYP_352234 
Protein GI77462730 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCA TACGACAGGC CCTGCTGGCC GCCGCCTCGA CCCTGGCCAT GGCCGGGACT 
GCCCTCGCCC AGGACCAGTG CCGCGAGGTG ACCTTCTCCG ACGTGGGCTG GACCGACATC
ACCGTCACCA CCTCCGCCAC CCGTCAGGTG CTCGAGGCGC TCGGCTACGA GGTCGAGGTC
GACATCCTCG GCGTGCCCGT GACCTACGCC TCGATGGACA AGGGCGACGT GGACGTGTTC
CTCGGCACCT GGCTTCCCGC TCAGGAAAGC GCCATCGGCC CCTATCTCGA GAAGGGCAGC
ATCGAGGAGA TCACGACGAA CCTCGAAGGC ACGAAATACA CGCTCGCGGT GCCGACCTAT
CTCTACGACA AGGGCCTGAA GAGCTACGGC GACATCGCCA AGTTCAAGGA CGAGCTGGAA
GGCAAGGTCT ACGGCATCGA GCCCGGCAAC GAGGGCAACG AATATCTCAT CAGCCTGACC
GAGGCCGGCA AGCCGCTCGA AGGGTTCGAG GTCGTCCAGA GCTCCGAGCA GGGGATGCTG
GCGCAGGTCG CCCGCTTCTA TCCGCAGGAG AAGGGCGTGG TCTTCCTCGG CTGGGAGCCC
CACCCGATGA ACGCCACCTT CTCGCTGAAA TACCTGCCGG GCGGCGAGGA TTTCTTCGGC
GAGGACGGCG TGGTCAAGAC CGTGGCGCGC AAGGGCTTCA AGGAAGACTG CCCGAACGTG
ACCAAGATGC TGTCGCAGCA GAAATTCACC CTGCCCATGG AGAACGAGAT CATGGGCAAG
ATCCTCGACG ACGGGATGGA GCCCGATGCG GCGGTGATGG AATGGCTGAA GGCCAACCCG
GAAACCGTCG ATCCCTGGCT CGCCGGCGTG ACGACGGTGG ACGGCAAGGA CGCGCTGCCG
GTGGTCAAGG AAGCCCTCGG CCTCTGA
 
Protein sequence
MTPIRQALLA AASTLAMAGT ALAQDQCREV TFSDVGWTDI TVTTSATRQV LEALGYEVEV 
DILGVPVTYA SMDKGDVDVF LGTWLPAQES AIGPYLEKGS IEEITTNLEG TKYTLAVPTY
LYDKGLKSYG DIAKFKDELE GKVYGIEPGN EGNEYLISLT EAGKPLEGFE VVQSSEQGML
AQVARFYPQE KGVVFLGWEP HPMNATFSLK YLPGGEDFFG EDGVVKTVAR KGFKEDCPNV
TKMLSQQKFT LPMENEIMGK ILDDGMEPDA AVMEWLKANP ETVDPWLAGV TTVDGKDALP
VVKEALGL