Gene RSP_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_2160 
Symbolgno 
ID3719630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp764032 
End bp764796 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content72% 
IMG OID640070329 
ProductShort-chain dehydrogenase/reductase 
Protein accessionYP_352214 
Protein GI77462710 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACT TCCTTCAGGG CCTCTTCAGC CTCACGGGCC GGCGCGCCAT GGTGACGGGC 
GCGAGCCGCG GGCTCGGGCA GGCCATCGCT CTGGGCCTCG CCGAGGCGGG GGCCGATCTC
GTGCTGACCG CCCGCGCGGC AGGCGCGCTC GAGGAGACGG CGGCCCGCAT CCGGGCGCTG
GGGCGCGAGG CGCTCTGCCT CGCGCTCGAC CAGTCCGACC CGGCCTCGGT CGCAGCCCCG
ATGGAGGCCG CCGGGCGGAT CGACATCCTC GTGAACAATG CTGGCACCGA GGAGGTCTGC
CCGTCCGAGG CGGTCACGCC CGAGCTCTGG GACCGGATCC TCGACACGAA CCTCCGCGGC
GCCTTCTTCG TCACGCAAGC GGCGGCGCGT GGGATGCTGG CCCGCGGACA GGGGTCGATC
GTCAACCTCT GCTCGCTCAC CTCCTTCGTA GGCGTGCCCA CGGCCGTGCC CTACGGCTCG
TCGAAGAGCG GGCTTCTGGG CATGACGCGG GCGCTGGCGG CCGAATGGGC CCCGCGCGGG
GTGCGGGTCA ATGCCATCGC GCCCGGCTAC TTCCGCACCG CCCTGACCGA GGTTTTCTAT
CAGAATGAGG ATTGGGCGCA GGCGATGCAG GCCAGGATCC CGCAGGGCCG CTTCGGGGAG
GGCCGCGATC TGGTGGGCGC TGCCGTCTTT CTGGCCTCGG ATGCCTCGGC TTACGTCACC
GGCCAGTGTC TCGGCGTCGA TGGCGGCTAT CTCGGCTCGA TCTGA
 
Protein sequence
MSDFLQGLFS LTGRRAMVTG ASRGLGQAIA LGLAEAGADL VLTARAAGAL EETAARIRAL 
GREALCLALD QSDPASVAAP MEAAGRIDIL VNNAGTEEVC PSEAVTPELW DRILDTNLRG
AFFVTQAAAR GMLARGQGSI VNLCSLTSFV GVPTAVPYGS SKSGLLGMTR ALAAEWAPRG
VRVNAIAPGY FRTALTEVFY QNEDWAQAMQ ARIPQGRFGE GRDLVGAAVF LASDASAYVT
GQCLGVDGGY LGSI