| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2099 |
|---|
| Symbol | murE |
|---|
| ID | 3719533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 698581 |
|---|
| End bp | 700068 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640070269 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_352155 |
|---|
| Protein GI | 77462651 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.213432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC GCGCAGCAAC ACTCTCGGCG CTCGGGCTCA CGCCCGCAGG CGGCCGCGGA
GGCGACATCG CCGTGACCGG CCTCGCGGTT GACAGCCGGC AAGTGCGCCC CGGCACCCTC
TTCGCGGCGC TGCCCGGCTC CCGCAGCCAC GGCGCGAGCT TCGTGCCGGC GGCGCTCGCC
GCAGGCGCCA CCGCGATCCT CACCGATGCC GCCGGCGCGG CGCTCGCGCG CGAGGCGCTC
GCGGGCTCGG GCGCGGCCCT CGTCCTGGCC GAGGATCCCC GCCAGACCCT CGCCGGCGCG
GCCGCCCTCT GGTTCGGCCG CCAGCCCGCG ACCGTGGTCG CCGTAACGGG CACCAACGGC
AAGACCTCGG TCGCGACCTT CACCCGCCAG ATCTGGGCGG CCCTCGGCCA TGCCGCGATC
AACATCGGCA CGACCGGCGT CGAGGGCGCC TTCGCAGCCC CCTCCGCCCA TACCACGCCC
GAGCCCATCA CCCTCCACCG GCTCCTCGCC GAGGCGGCCG AGGCGGGCGT CACCCATGCC
GCCATGGAGG CCTCCTCCCA CGGGCTCGAG CAGCGCCGCC TCGACGGCGT GCATCTCGCG
GCCGCGGGCT TCACCAACTT CACCCAGGAC CATCTCGACT ATCACGAGAC CTTCGAGGCC
TATTTCGCCG CCAAGGCCGG GCTCTTCACC CGGGTCTTGC CCGACGAGGG CACGGCGGTC
GTCAATCTCG ACGATCCCCG CGGCCCCGAG ATCGCGGCCC TCGCGCGGGC GCGCGCGCAA
CGGGTGATCG GCACGGGCTT TCACGCCGAT GCGGACCTGC GCCTTCTCTC GCAGCGCTTC
GACGCGACCG GGCAGGACCT CCGCTTCTCC TGGCAGGGCG AGGTGCATCT CGCGCGTCTG
CCGCTGATCG GCGGCTTCCA GGCCTGGAAC GTCGCGGTCG CGGCCAGCCT CGCCATCGGC
GCGGGCGACG CCCCCGAGCG GGTCTTCGCC ACCTTCTCCC GGCTTCAGGG CGTGCGCGGG
CGGATGCAGC TCGCCGCCAC CCGCAAGAAC GGTGCCTCGG TCTTCGTCGA TTATGCCCAT
ACGCCCGACG CCCTCGCCAC CGCCCTCAAG GCGCTGCGCC CGCATGTGAT GGGGCGCATC
GTCGTCGTCT TCGGTGCCGG CGGCGACCGC GACCGCGGCA AGCGCCCGCT GATGGGCCGC
GCCGCGGCAG ACCATGCCGA CGTGCTCTAT GTCACCGACG ACAATCCCCG CACCGAGGAT
CCCGCCGCCA TCCGCCGCGC CATCCTCGAG GCCTGCCCCG AGGCGCATGA GGTGGGCGAC
CGGGCCGAGG CCATCCTGCG CGGCGTCGAT GCGCTCACGC CGGGCGACGC GCTCCTCATC
GCGGGCAAGG GCCACGAATC GGGCCAGGTG GTGGGCACCG ACATCTTCCC CTTCGACGAT
GCCGAACAGG CGAGCATCGC CACCGCCGCG CTGGACGGGC TGATATGA
|
|---|
| Protein sequence | MADRAATLSA LGLTPAGGRG GDIAVTGLAV DSRQVRPGTL FAALPGSRSH GASFVPAALA
AGATAILTDA AGAALAREAL AGSGAALVLA EDPRQTLAGA AALWFGRQPA TVVAVTGTNG
KTSVATFTRQ IWAALGHAAI NIGTTGVEGA FAAPSAHTTP EPITLHRLLA EAAEAGVTHA
AMEASSHGLE QRRLDGVHLA AAGFTNFTQD HLDYHETFEA YFAAKAGLFT RVLPDEGTAV
VNLDDPRGPE IAALARARAQ RVIGTGFHAD ADLRLLSQRF DATGQDLRFS WQGEVHLARL
PLIGGFQAWN VAVAASLAIG AGDAPERVFA TFSRLQGVRG RMQLAATRKN GASVFVDYAH
TPDALATALK ALRPHVMGRI VVVFGAGGDR DRGKRPLMGR AAADHADVLY VTDDNPRTED
PAAIRRAILE ACPEAHEVGD RAEAILRGVD ALTPGDALLI AGKGHESGQV VGTDIFPFDD
AEQASIATAA LDGLI
|
|---|
| |