Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1971 |
Symbol | rnd |
ID | 3719302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 562467 |
End bp | 563624 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640070132 |
Product | ribonuclease D |
Protein accession | YP_352020 |
Protein GI | 77462516 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCA TCACCACCAC CGAGGCGCTG GCCGCCTTCT GCGAGGCCGC CAAGGCCGAA CCCTATGTCA CGATCGACAC GGAATTCCTG CGCGAGCGCA CCTACTGGTC CAAGCTCTGC CTGATCCAGA TGGCGCTGCC GGGCAAGACC GGCGAGGCGG TGCTGGTGGA CCCCATCGAG GGGCCCGACA TGTCGCTCGA GCCGCTCTAC GACCTCTTCC GCCACGAGGC GACGGTGAAG GTCTTCCATG CCGCCCGGCA GGATCTCGAG ATCTTCTTCG TAGAGGGGCG CGCCTTCCCC GTGCCGCTCT TCGACACGCA GGTCGCGGCC ATGGTCTGCG GCTTCGGCGA GCAGGTCGGC TACGAGACGC TGGTCAAGAA GATCGCACGC GAGCAGCTCG ACAAGACCTC GCGCTTCACC GACTGGTCGC GCCGTCCGCT CAGCGACGCG CAGAAGACCT ATGCCATCGC CGATGTGACC CACCTGCGGG TGATCTACGA ATGGCTTTCG GCTCAGATCG AGAAGAACGG CCGGCAGAAG TGGGTCGAGG AAGAGCTCGC GATCCTCACC GATCCCGAGA CCTACACGGT CCGGCCCGAA GAGGCTTGGC TCAGGATCAA GACCCGCACC ACCTCGGGGC GCTTCCTCGC CGTGGTGAAG GAGCTCGCCC GTTTCCGCGA GGACTATGCG CAGAAGAACA ACGTCCCGCG CTCGCGGGTG ATGAAGGACG ATGCGCTGCT CGAGATCGCC TCCACGCGGC CCACGAATGC CGAAGAGCTG GGCCGCTCGC GGCTTCTGCT GCGCGAGGGG AGGCGGGGCG ACATCGCCGA TGGCATCCTT GCCGCGGTGA AGGCGGGCAT GGAGGTCAAG AACGAGGACC TGCCGAAGCC CGATCTCTCG CGCGAGCAGC TTCAGGTGAA CCCGGCGCTG GCCGATCTCC TGCGGGTGCT GCTCAAGGCC AAGTCGGAAA GTCTGGGCGT TGCGGCGCGG CTCATCGCCT CGGCCTCCGA GCTCGATGCC ATTGCCGCGG GCGAACGCGA CCTGCCCTCG CTCAAGGGCT GGCGGCTCGA GGCCTTCGGG GCCGATGCAC TGCGCCTCTG CCGGGGCGAG ATCGCCCTGT CGGCCAAGGG CAACGACGTG CGCGTGGTCA AGCTCTGA
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Protein sequence | MQTITTTEAL AAFCEAAKAE PYVTIDTEFL RERTYWSKLC LIQMALPGKT GEAVLVDPIE GPDMSLEPLY DLFRHEATVK VFHAARQDLE IFFVEGRAFP VPLFDTQVAA MVCGFGEQVG YETLVKKIAR EQLDKTSRFT DWSRRPLSDA QKTYAIADVT HLRVIYEWLS AQIEKNGRQK WVEEELAILT DPETYTVRPE EAWLRIKTRT TSGRFLAVVK ELARFREDYA QKNNVPRSRV MKDDALLEIA STRPTNAEEL GRSRLLLREG RRGDIADGIL AAVKAGMEVK NEDLPKPDLS REQLQVNPAL ADLLRVLLKA KSESLGVAAR LIASASELDA IAAGERDLPS LKGWRLEAFG ADALRLCRGE IALSAKGNDV RVVKL
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