Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1870 |
Symbol | |
ID | 3719138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 468239 |
End bp | 468886 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640070030 |
Product | hydrolase |
Protein accession | YP_351921 |
Protein GI | 77462417 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.777911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCCG ATCGTTTCTC ACATGTCCGG GGCTGGGTCT TCGACCTCGA CAACACGCTC TATCCCCCGT CCGCGCGCCT CTTCGACCAG ATCGAGCGAC GGATGACGGA CTGGGTGATG ACCGAGCTTC GCGTGGTGCG GGAGGAGGCC GACCGGCTCC GGCGGCATTA CTGGTCCACC TACGGCACCA CGCTGGCAGG GCTGATGGCC GAGCACGGGG TCGATCCCGC GCCCTATCTG AGCCATGTCC ACGACATCTC GCTCGACCAT CTCGAGCGCG ACATGATCCT CGCCGCGCGC ATCCGGGCGC TGCCGGGGCG CAAGATCGTC TATACCAACG GCTGCGCGCC CTATGCCGAG CGCGTGCTCG AGGCGCGCGG CCTCGCGAAC CTCTTCGATG CGGTCTATGG CGTCGAACAT GCGGGCTTCC GGCCGAAGCC CGACCGCGCG GCCTTCGAGA CCGTCTTCGC CGCCGACCGG CTGGCGCCCG GGACCGCGGC CATGTTCGAG GACGATTCGC GCAATCTCCT CGCGCCGCAC GAGATGGGGA TGCGCACCGT CCATGTGGCG CCCGAGGCGC TCCCTGCGCC GCACATCCAC CACCACACGC TCGATCTGTC GGAGTTCCTG GCCCTTCTGC AGCCCTGA
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Protein sequence | MVADRFSHVR GWVFDLDNTL YPPSARLFDQ IERRMTDWVM TELRVVREEA DRLRRHYWST YGTTLAGLMA EHGVDPAPYL SHVHDISLDH LERDMILAAR IRALPGRKIV YTNGCAPYAE RVLEARGLAN LFDAVYGVEH AGFRPKPDRA AFETVFAADR LAPGTAAMFE DDSRNLLAPH EMGMRTVHVA PEALPAPHIH HHTLDLSEFL ALLQP
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