| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1859 |
|---|
| Symbol | ppdK |
|---|
| ID | 3719126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 456004 |
|---|
| End bp | 458550 |
|---|
| Gene Length | 2547 bp |
|---|
| Protein Length | 848 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640070018 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_351909 |
|---|
| Protein GI | 77462405 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.650023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAAA TCGAGCCGAT CAGCGACTTC GACCGTATCA CGCCGACCGC GGCGATCAGC
CTGAAGACGC ATGGCTTCCG GGCCAAGTGC CTGCAGCGCC TCGTCCGGCT CGACCTGCCG
GTGCCGGTCA CCGTGGCGCT GCCCGCCACC ACCGTCCGCG CCATCGCGGC CGGCCACCCG
GTCGATTGCC CGGCCATTCT CGCCGATTTC GGCCCCACTC CCCTCGTCTC GGTGCGGCCC
AGCCCCGAGA ATCCCGACTG GGGCGGACCC GCCACCGTCC TCAACATCGG CATGAACGCG
GCCCGCCACG CGGCGCTCGC GCGCATCCAT GGCGAGGAGG CGGCCGACGC GATCTATCTC
GGCTTCATCC AGAGCTATGC GATCCATGTG GCCCGCCTCG ATCCCGAGAT GTTCGAGACC
GGCGGCTCCT CCTCCGAGGC GCTCCGCGCG GCGCTCCATG CCTGGGCCGA GGAGATGGAC
GAGCCCTTCC CGCAGGATCC CGCACAGCAG CTCTCCGAAG TGCTGCGCTC GATGGCGCGG
GCCTGGGAGG GAACGACCGC CCGGCTCCTC CGGCAGGCGA AGGGCGCCCC CGCCGAGGCG
CGGCTCGGCC TCGTCGTGCA GGAGATGGCG CAGGATCTGG GGCAGGGGAT CTCGGGCTCG
GGCGTGATCC AGTTCGTCGA TCCCGCCACC GGCGTCCCGC AGGTGACGGG GCGCTTCTTC
AACCGCTCGC GCGCCTGGCA CGGCAAGGCC GAGACGCTCT ATCTCACGCA GGATCCGCGC
GGTCCCTCGC TCGAGGAGCG CGCGCCCGAG ATCTTCGCGG CCCTCTGCCG CCACGGCTCG
GTCTGCCGCG CCCGCCTGCG CGAGGAGATG CAGATCGAAT TCACCATCGA GGACAGCCAC
CTGTCGGTGC TCGACGCGGT GAAGGTGCAG CGCTCCTCGC GGGCGGGGCT CCGCATCGCG
GTGGCGCTGG CCGACGATCA GGTCATCACC CGCTCCGAGG CGCTCCTCCG GGTCGAGCCG
CGCGCGCTCT CCGAGCTTCT GCATCCGCAG GTCGATCCGC GCGGGCGGCG CGACCGCTTC
GCCCGCGGCA TTGCGGCCAG CCCCGGGGCG GCGGTGGGCC GGATCGTCTT CTCCTCGCAG
GCGGCGCAGG CCTCGGCCGC GCGCGGCGAG CCCTGCATCC TCGTCCGGCG CGAGACCTCG
CCCGAGGATA TCCGCGGCAT GAACTGCGCG GCGGGCGTGC TGACCGAGCG CGGCGGCGTC
ACGAGCCATG CCGCCGTGAT CGCGCGGGGC CTCGGCCTGC CGTGCGTCGT GGGCGCCTCC
GAGATCCGGC TCGATGCGCG CGAGCGCCGT CTCGTGGCGC CCGACGGGCG CGTCTTCCGC
GAGGGCGACC TCATCACCGT GGACGGCACG GCGGGCGAGG CGCTCGCGGG CGAGGCGGCC
ATGCTCGCGC CCGCGCTCGA CAGCTGCTTC CGCAAGCTCC TCTCCTGGGC CGACGAGATG
CGCGACATCG GCGTGCGCGC CAATGCCGAC ACGCCCGCCG ATGCGCTCGT CGCGCGGCAG
TTCGAGGCGC AGGGCATCGG CCTCTGCCGG ACCGAGCACA TGTTCTTCAC CGACGACCGG
CTCGTGGTGA TGCGCGAGAT GATCTTTGCC GACAGCGCGA CCGACCGGGC GGCGGCTCTG
GCGCGGCTGC TGCCGATGCA GCGCGCCGAT TTCGTGCAGC TCTTCGAGAT CATGCAGGGT
CATCCGGTCT GCATCAGGCT GCTCGATCCG CCGCTGCACG AGTTCCTACC CCATTCGCGC
GAGGGGCTGC TGGAGCTGGC CGAGGCGCTC GACCGGCCCC TGTCCGAGGT CACGCGGCGC
GTCGAGGCGA TGGCCGAGTT CAATCCCATG CTGGGGATGC GGGGCGTGCG GCTGGGTGTG
GCCATCCCCG AGATCTACGA CATGCAGGCG CAGGCGATCT TCGAGGCGAC GCTGGAGGTG
GCGGGCCGCG GCGATCCGGT GGTGCCCGAG ATCATGATCC CGCTCGTCTC GGCGCGGCGC
GAGGTCGAGC TGGTCAAGAC CCGGATCGAT GCGGTGGCTG CGGCGGTCCA TACCAAATAC
GGCCGCGAGT TCGCCTACCG GCTGGGGGTG ATGGTCGAGA CGCCGCGGGC GGCGCTGCGG
GCGGGCGAGA TCGCGCAGCA CGCGGCCTTC CTCTCCTTCG GCACCAACGA CCTGACGCAG
ATGACCTACG GCCTCTCGCG CGACGACGCG GGGCGTTTCA TGAACACCTA CGTCCAGAGC
GGGGTCTTCC CCGAGGATCC GTTCCACATT CTCGACGTGG ACGGGGTGGG GGAACTGCTG
CTGATCGGGG CGGAACGGGG GCGGGCCACG CGGCCCGATC TGGTGGTCTC GATCTGCGGC
GAACATGGCG GCGACCCCGA ATCAATCGAG TTCTGCCGCC GCGCCGGCTT CGACTATGTG
TCCTGTTCGC CCTATCGCGT TCCGCTGGCT CGGCTGGCGG CCGCTCATCT GGCGATCCGC
AGCCGGGAGC AGCCGAATGC CTCTTGA
|
|---|
| Protein sequence | MQKIEPISDF DRITPTAAIS LKTHGFRAKC LQRLVRLDLP VPVTVALPAT TVRAIAAGHP
VDCPAILADF GPTPLVSVRP SPENPDWGGP ATVLNIGMNA ARHAALARIH GEEAADAIYL
GFIQSYAIHV ARLDPEMFET GGSSSEALRA ALHAWAEEMD EPFPQDPAQQ LSEVLRSMAR
AWEGTTARLL RQAKGAPAEA RLGLVVQEMA QDLGQGISGS GVIQFVDPAT GVPQVTGRFF
NRSRAWHGKA ETLYLTQDPR GPSLEERAPE IFAALCRHGS VCRARLREEM QIEFTIEDSH
LSVLDAVKVQ RSSRAGLRIA VALADDQVIT RSEALLRVEP RALSELLHPQ VDPRGRRDRF
ARGIAASPGA AVGRIVFSSQ AAQASAARGE PCILVRRETS PEDIRGMNCA AGVLTERGGV
TSHAAVIARG LGLPCVVGAS EIRLDARERR LVAPDGRVFR EGDLITVDGT AGEALAGEAA
MLAPALDSCF RKLLSWADEM RDIGVRANAD TPADALVARQ FEAQGIGLCR TEHMFFTDDR
LVVMREMIFA DSATDRAAAL ARLLPMQRAD FVQLFEIMQG HPVCIRLLDP PLHEFLPHSR
EGLLELAEAL DRPLSEVTRR VEAMAEFNPM LGMRGVRLGV AIPEIYDMQA QAIFEATLEV
AGRGDPVVPE IMIPLVSARR EVELVKTRID AVAAAVHTKY GREFAYRLGV MVETPRAALR
AGEIAQHAAF LSFGTNDLTQ MTYGLSRDDA GRFMNTYVQS GVFPEDPFHI LDVDGVGELL
LIGAERGRAT RPDLVVSICG EHGGDPESIE FCRRAGFDYV SCSPYRVPLA RLAAAHLAIR
SREQPNAS
|
|---|
| |