Gene RSP_1730 details

Gene Information

• Locus tag: RSP_1730
• Symbol: rplF
• ID: 3718936
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 315217
• End bp: 315750
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640069887
• Product: 50S ribosomal protein L6
• Protein accession: YP_351778
• Protein GI: 77462274
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00717993
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTA TCGGCAAGAA ACCCGTACCG CTGCCGAAAG GCGTGACGGC CTCGATCTCG 
GGCCAGTCGA TCGAAGTGAA GGGCCCGAAA GGCACCCGCA GCTTCTCGGC GACCGACGAC 
GTGACCCTCG CGCTGGACGA AGGTTCGGTG AAGGTGACCC CGCGCGGCAC CTCGAAGCGT 
GCCCGTCAGC AATGGGGCAT GGTGCGGTCG CAGGTGGAAA ACCTCGTGAC CGGCGTCACC 
AGCGGCTTCA AGAAGGAGCT GGAGATCTCG GGCGTGGGTT ACCGCGCGCA GATGGCCGGC 
AACGTGCTGA AGCTCTCGCT CGGCTATTCG CACGACGTCA ACTTCGAGGT TCCGGCGGGT 
GTCACCGTCA CCACCCCGAA GCAGACCGAG ATCACGGTCG AAGGCATTGA CCAGCAGCTG 
GTCGGCCAGG TGGCGGCGAA CATCCGCGAG TGGCGGCGTC CCGAGCCCTA CAAGGGCAAG 
GGCATCCGCT ACAAGGACGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRIGKKPVP LPKGVTASIS GQSIEVKGPK GTRSFSATDD VTLALDEGSV KVTPRGTSKR 
ARQQWGMVRS QVENLVTGVT SGFKKELEIS GVGYRAQMAG NVLKLSLGYS HDVNFEVPAG 
VTVTTPKQTE ITVEGIDQQL VGQVAANIRE WRRPEPYKGK GIRYKDEFIF RKEGKKK