Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1717 |
Symbol | rplD |
ID | 3718922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 308776 |
End bp | 309396 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640069873 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_351764 |
Protein GI | 77462260 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.27266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTG AAGTCATCAA GCTGGACGCG AGCCCCGCTG GCTCGATTGA ACTCGACGAC GCGATCTTCG GTCTGGAGCC GCGCGCCGAC ATCCTGCACC GCGTCGTGCG CTGGCAGCGG GCGAAGGCCC AGGCCGGCAC GCACTCGGTG CTCGGCAAGT CGGACGTGAG CTACTCGACC AAGAAGATCT ATCGCCAGAA AGGCACCGGC GGCGCTCGCC ACGGGTCCAA GAAGGCGCCG ATCTTCCGTC ACGGTGGCGT CTACAAGGGC CCGACCCCGC GCAGCCACGC CCACGACCTG AACAAGAAGT TCCGGGCGCT CGGGCTGAAG CACGCGCTGT CGTCCAAGGC CACGACGGGC AACCTGATCG TGCTCGAGGA CATCGCGCTG GCCGAAGGCA AGACCGCGAT GCTCGCGAAA GCGGTGAAGG AACTCGGCTG GAAGCGCGTG CTCGTCATCG ACGGCGCTGA CATCAACGAG AACTTCGCCA AGGCCGCGCG CAACCTCGAA GGCGTGGACG TGCTGCCGTC GATCGGGGCG AACGTGTATG ACATCCTGAA GCGTGACACG CTCGTGATCA CGAAGGCGGG TGTCGAAGCT CTGGAGGCTC GTCTGAAATG A
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Protein sequence | MKAEVIKLDA SPAGSIELDD AIFGLEPRAD ILHRVVRWQR AKAQAGTHSV LGKSDVSYST KKIYRQKGTG GARHGSKKAP IFRHGGVYKG PTPRSHAHDL NKKFRALGLK HALSSKATTG NLIVLEDIAL AEGKTAMLAK AVKELGWKRV LVIDGADINE NFAKAARNLE GVDVLPSIGA NVYDILKRDT LVITKAGVEA LEARLK
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