Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1474 |
Symbol | nspC |
ID | 3718769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 58616 |
End bp | 59713 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640069622 |
Product | putative carboxynorspermidine decarboxylase protein |
Protein accession | YP_351517 |
Protein GI | 77462013 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAGA CACCTTACTA TCTGATCGAC GCGGACAGGC TGCGGCAGAA CATGGCGGTC GTGGACCGGC TGCGGCAGGC CTCGGGAGCG AAGGCGCTTC TGGCGCTGAA ATGCTTCGCC ACCTGGCCCG CCTTCGAGCA TATGCGCGAC CATATGGACG GCACGACCTC CTCGTCGCTC TACGAGCTGC GGCTCGGGCG CGAGAAGTTC GGCAAGGAGA CTCACGCCTA TTCGGTGGCC TGGCCCGATC ACGAGATCGA CGAGGCCGTG GGTTATGCCG ACAAGATCAT CTTCAACTCG GTGGGCCAGC TCGCGCGCTT CCGCAACCGC ACCGGGGGCA TCGCCCGCGG GCTGCGGCTG AACCCGGGGC TCTCGACCTC GGGCTTCGAC CTGGCCGATC CGGCGCGGCC CTTCTCGCGG TTGGGCGAAT GGAGCGCGGA GAAGATCGAG GCGGTGCTGC CCGACATCTC GGGCGTGATG ATCCATTACA ATTGCGAGAA TGCCGATGTC GACCTGTTCG AACGGCAGCT CTCCGAGATC GAGGGCCGCT TCGGCGCGAT CCTCGACCGG CTGGACTGGG TGAGCCTCGG CGGCGGCATC CATTTCACGG GCGAGGGCTA TCCGGTGGAC CGGCTGGCCG CGCGGCTGAA GGCCTTCGCC GCGGCGCATG GGGTGCAGGT CTATCTCGAG CCGGGCGAGG CCGCGATCAC GCGCTCGGCC ACGCTCGAGG TGACGGTGCT GGACCTGCTC GACAACGGCA AGCAGCTGGC CATCGTGGAC AGCTCGGTCG AGGCGCACAT GCTGGATCTG CTGATCTACC GGCAGTCGGC CAAGGTTGAA CCCGACGCCG GAGATCATAG CTACATGGTC TGCGGCAAGT CCTGCCTTGC GGGGGACATC TTCGGCGAGT TCCGGTTCGC CCAGCCGCTG CAGGTGGGCG ACCGCCTCTC CATCGCGGAT GCCGCGGGCT ACACGATGGT GAAGAAGAAC TGGTTCAACG GGGTGAAGAT GCCCTCGATC GTGATCCGCG AGCCCGACGG ATCGCTGCGC GTGGCGCGCG AGTTCGGCTA TGGCGACTAT GCCTCGAGCC TCGGCTGA
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Protein sequence | MIQTPYYLID ADRLRQNMAV VDRLRQASGA KALLALKCFA TWPAFEHMRD HMDGTTSSSL YELRLGREKF GKETHAYSVA WPDHEIDEAV GYADKIIFNS VGQLARFRNR TGGIARGLRL NPGLSTSGFD LADPARPFSR LGEWSAEKIE AVLPDISGVM IHYNCENADV DLFERQLSEI EGRFGAILDR LDWVSLGGGI HFTGEGYPVD RLAARLKAFA AAHGVQVYLE PGEAAITRSA TLEVTVLDLL DNGKQLAIVD SSVEAHMLDL LIYRQSAKVE PDAGDHSYMV CGKSCLAGDI FGEFRFAQPL QVGDRLSIAD AAGYTMVKKN WFNGVKMPSI VIREPDGSLR VAREFGYGDY ASSLG
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