| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1392 |
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| Symbol | thiP |
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| ID | 3720798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 3169988 |
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| End bp | 3171502 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640072618 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_354472 |
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| Protein GI | 77464968 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGAC GCGCTGGCGC GCTGATCGTC GCCGCGGCGC TGGCCGCGCT GACGCTGGGC
CCGCTCGCGC TCGTGATGGC GCGGGCGGGC GGCGGCGCGC TCGGTCCGGC CGATTGGGCG
GCAGTGCGCT TCACCGTCCT GCAGGCGGCA CTGTCTGCGG TGGTCTCGGT TCTGCTGGCG
GTGCCGGTGG CCCGCGCGCT CGCCCGCCGC AGCTTCCCCG GCCGTCGACT GATGATCGCG
CTGCTGGGCG CGCCCTTCCT GCTGCCGGTG ATCGTGGCGG TCCTTGGGCT GATCGCGGTT
TTCGGCCGGG CGGGGCTGCT GAACCGGGGG CTCGAGGCCG TGGGCCTGCC CGCGCTTTCG
ATCTACGGGC TCCACGGTGT CGTGCTGGCC CATGTCTTCT TCAACATGCC CTTCGCCGTC
CGGCTGATCC TGCAGGGCTG GCTCGCGATC CCGTCCGAGC GTTTCCGGCT GGCGGCCGCG
CTCGGCTTCC GGCCGGCCGA TGTGGCGCGG CATCTGGAAT GGCCGATGCT GCGGGCGGTG
GTGCCGGGCG TGGCGCTGGT GGTCTTCGTG ATCTGCCTGT CGAGCTTCGC CGTGGCCCTG
ACGCTGGGCG GCGGCCCGCG GGCCACGACG GTGGAGCTTG CGATCTATCA GGCCCTGCGG
TTCGAGTTCG ACCTGGGCCG CGCGGCGCTG CTGGCTGCGC TGCAATTCGC ACTCTGCGGG
GCAGCGGTGC TGGCCACTGG CGCCCTGTCG CTGCCCTCGG CCTTCGGCGC AGGGCTCGAC
CGCGCGCCTG TGCCCCTCGC GCCGGGGGGC TGGCGGCGCG GGGCGGACGG CTTGGCGCTG
GCGCTGGCCG CGGCTTTCCT CCTTCTGCCG CTCGGCATGG TCGCCGCGCG CGGGGCGCCG
GGGCTTCTCC ATCTGCCGTC CGATGTCTGG GCCGCGGCGG GCCGGTCGCT CGCGGTGGCA
CTGCCCTCGG CCGCCCTCTC GGTGACCGGC GCGCTGGTGC TGGCGCTGGC GGGCCCCCGC
TTCGGGCTGG TGGCGACCCT GCCGCTCGCC GCCTCCTCGC TCGTCCTCGG CACCGGGCTG
TTCCTTGCTG TCCATCCCGT CCTCAATCCG ACGCTGGTCG CGCTGCCGGT GACGATGCTC
GTCAATGCCA CGCTCACGCT GCCCTTCGCC TATCGCATCC TCGCACCCGA GGCGCGCGCG
CTTGAGGCCG ATTACGGCCG GCTCGCCGCG GCTCTGGGCC TTGGCGGCAT GGCGCGGCTG
CGCTGGCTCA CGCTGCCGCG GCTGCGCCGT CCGCTGGGCT TCGCTCTGGG CGTGGCGTCG
GCGCTGGCGA TGGGGGATCT GGGCGTCATC GCGCTCTTTG CCGCCGAGGG GGGCGCCACG
CTGCCGCTTC TCGTCCAGCG GCTGATGGGT GCCTACCGGC TGGAAGAGGC GGCGGGGGCG
GCGCTGCTTC TGGTGCTCAC GAGCTTCGCC CTCTTCTGGA TCTTCGACCG CGGAGGCCGC
CATGCTGCAT CTTGA
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| Protein sequence | MARRAGALIV AAALAALTLG PLALVMARAG GGALGPADWA AVRFTVLQAA LSAVVSVLLA
VPVARALARR SFPGRRLMIA LLGAPFLLPV IVAVLGLIAV FGRAGLLNRG LEAVGLPALS
IYGLHGVVLA HVFFNMPFAV RLILQGWLAI PSERFRLAAA LGFRPADVAR HLEWPMLRAV
VPGVALVVFV ICLSSFAVAL TLGGGPRATT VELAIYQALR FEFDLGRAAL LAALQFALCG
AAVLATGALS LPSAFGAGLD RAPVPLAPGG WRRGADGLAL ALAAAFLLLP LGMVAARGAP
GLLHLPSDVW AAAGRSLAVA LPSAALSVTG ALVLALAGPR FGLVATLPLA ASSLVLGTGL
FLAVHPVLNP TLVALPVTML VNATLTLPFA YRILAPEARA LEADYGRLAA ALGLGGMARL
RWLTLPRLRR PLGFALGVAS ALAMGDLGVI ALFAAEGGAT LPLLVQRLMG AYRLEEAAGA
ALLLVLTSFA LFWIFDRGGR HAAS
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