Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1374 |
Symbol | lpsB |
ID | 3720820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 3153176 |
End bp | 3154210 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640072601 |
Product | putative lipopolysaccharide core biosynthesis mannosyltransferase protein |
Protein accession | YP_354455 |
Protein GI | 77464951 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.95954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTGC AGCCGGATCG GATCGAGGTC ATCGCGCCCA ACCTCAAGCG TCGCCTCTCG GGGGTGACGG CCACCATCGC GCGGCTGGTG CCGGTTCAGG CGCGCCTGAT CGGCATCGCG GCCACCGGCC CGGGGCTGCC CGCAGACCTT CCGCACCTGC CGCTCTGGCG CCTGCCGTTC CTGCCGCGCG ACCGCTGGCG GGTCTGGCAC GCCCGGCGCA ACACCGAGAT GCTGCTGGGC ATCGCGCTGC GCCATCTGCT GCGCCGGCGG CTGAAGCTTC TCTTCACATC GGCCTCGCAG CGCCGGCACA CGGGCTATAC GCGCTGGTTG ATCGGGCGGA TGGATGCGCT GGTCGCCACC TCGCGCCGGA CGGCCTCCTA TCTCGAGCGG CCCGCCGAGG TGATCCTGCA CGGGATCGAC ACCGACACGT TCCGCCCCGG CGACCGGGCC GAGGTGCGGG CGCGGCTGGG CCTGCCCGAG GCGGTGCTGG TGGGCTGCTA TGGCCGGATC CGGGCGCAGA AGGGCACGGA TGTGTTCGTT CATGCCATGA TGCGGCTCCT GCCCGAGCGG CCGGGCGTGG CTGCGGTGGT GATGGGGCGC GCGGTGGGCG AGCATCAGGC GTTTCTCGAC GGGCTCCGCC GCGAGGTCGA GGCGGCGGGG CTGGGCCAGC GCATCCTGTT CCGGCCCGAG GTCACGGTGG ATCGGATGCC CGACTGGTAT CGCGCGCTCG ATCTCTATGT GGCGCCGCAG CGGTGGGAGG GCTTCGGGCT CACGCCGCTC GAGGCGATGG CCTGTGGCGT GCCGGTGGTG GCGACCCGCG TCGGCGCCTT CGAGGAGCTG GTGAGCGCGG ACACGGGGCG GCTCGTGCCC CCGGGCGATC TCGCGGCGAT GGTGGCGGAG GTGGCGGCGC TCCTCGACGA TGCCGCCCTT TGCGGCCGGA TGGCCGAGGC CGCCCGGGCG CGCACCCTCA AGGGGTTCCG CATCGAGGAT GAGGCGGCGG CCCTCGTCGC GCTCTACCGG AGGCTTCTTG CATGA
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Protein sequence | MPVQPDRIEV IAPNLKRRLS GVTATIARLV PVQARLIGIA ATGPGLPADL PHLPLWRLPF LPRDRWRVWH ARRNTEMLLG IALRHLLRRR LKLLFTSASQ RRHTGYTRWL IGRMDALVAT SRRTASYLER PAEVILHGID TDTFRPGDRA EVRARLGLPE AVLVGCYGRI RAQKGTDVFV HAMMRLLPER PGVAAVVMGR AVGEHQAFLD GLRREVEAAG LGQRILFRPE VTVDRMPDWY RALDLYVAPQ RWEGFGLTPL EAMACGVPVV ATRVGAFEEL VSADTGRLVP PGDLAAMVAE VAALLDDAAL CGRMAEAARA RTLKGFRIED EAAALVALYR RLLA
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