Gene RSP_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1357 
Symbol 
ID3720803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp3133645 
End bp3136194 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content70% 
IMG OID640072584 
Productcytoplasmic sensor hybrid histidine kinase 
Protein accessionYP_354438 
Protein GI77464934 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCG AGCAGAAGCT GGCCAAGGAG CGGCGGGCGC GGCTGGCTGC CGAACGGCTG 
CTGGAATACA AGCAGCGCGA GCTTTTTGCC GCCAACGAGA AGCTCGCGAT CCACGCCCGC
GCGCTGTCGG ATCAGATCAT CGAGCAGCGC GCCGTGGTCA AGACAGCCCT CTCCGAGGCC
GAGAAGCTGA AGGGGCAGAA CAGCCGCTTC CTCTCCGAAC TCGAACGCGC CCACACCGCC
GCCGTCATGG CCGAGCGGCG GCTGTGGGAT TCGATCGACG CGATCGAGGA CGGGTTCGCC
GTCTTCGACG CCGGTCAGCG CCTCGTGGCC GCGAACGAGG CCTACCGCTG CCATTTCGAG
GGGCTCGAGG TGCGGCCGGG CATGGCGCTG GCCGACCTCC TGCAGCTGGC CACCACCCAT
GGGCTGATCG ACCTGCGCGG CGAGCCCGCC GATCACTGGC GGCAGCGCAT GATCCGCCGC
TGGGACGAGG ATCCGGTCGA GCCCGAGATC GTGCGCCGCT GCACCGGCCA ATGGCTGCGG
CTGGTGAACC GGCGCGCGCG CGACGGCGAC ATGGTGAGCC TTCTCATCGA CATCACCGAG
CAGATGCGGC TCCGCGCGGC CATCGACGCG ATCCCCGACG GATTCGTCCT CTTCGACCGG
GCCGAGCGGC TGGTGCTCTG CAACGACCGC TATCGCGCGA TCTATCCCCG TTCCGCCGAG
GCGCTGCGGC CCGGCGCCCC GTTCGAGGAG ATCCTGCGGC ACGGGCTCGC GCACGGTCAG
TTCCCGGAAG CCGCGGGCCG CGAGGAGGAG TGGCTGGCCG ACCGCCTCGC GGCCTTCCGT
CACCTCGGCG GCGCGGCCGA GCAGCAGCTC GACGACGGGC GCTGGCTGCG GGTGATCGAG
CACGAGACCC CCGATGGCGG CCGCGTGGGC CTCGGCGTCG ACATCACCGA GCTGAAGCGC
CAGCAGGCCG CGCTCGAATC CGCCCGCGCC GCCGCCGAGG CCGCCAGCCG GGCGAAGTCC
GCCTTCCTCG CCAACATGAG CCACGAGATC CGCACGCCCA TGAACGGGAT CGTGGGCATG
GCGGACCTCC TCTGCGAGAC CGTGCTGACC GAGGATCAGC GCCTCTTTTC CGAGACCATC
CGGTCGTCGG GCGAGGCGCT TCTCGTCATC ATCAACGACA TCCTCGACTA TTCGAAGATC
GAGGCGAACC GGCTGACGCT GCACCCCGAG CCCTTCGATC TCGAACGGAC CATCCACGAG
GTCGCCATGC TGCTCCAGCC CAAGGCGCGG GCCAAGGGGA TCGACCTGCT CATCGACTTC
GACCTGTTCC TGCCCACGCG CTTCGTGGGC GACCCGGGGC GGCTGCGACA GGTGCTGACG
AACCTGATCG GCAATGCGGT CAAGTTCACG GCCGCCGGCC ATGTGCTGAT CCGTGTCGTG
GGCCTCGAGG TCGCGCCGGG GCGGCACGAC CTGCGCGTGA CGGTCGAGGA TACCGGGATC
GGGATCGCGC CCGAGCATCT CGACCATGTG TTCGGCGAGT TCAACCAGAT CGAGGCCGAG
GCCACCCGCC GCTTCGAGGG CACCGGCCTC GGCCTCGCCA TCACCCGCCG CCTGATCGAG
CTGATGCAGG GGGCGGTCTG GGTCGAGAGC GAGCCGGGGC GCGGCTCCTG TTTCGGCTTC
CGCCTGACGC TGCCCGCCGC CGATGACGAG GCCGCCCCGC CGGTGCCGAT CGAGGTGCGC
CGCGCGCTGG TGGTGGATGG CCAGTTCATC AACCGCACCA TTCTCGAACG CCAGCTTGCC
CCTTGCGGCA TCTCGGTCAC GCTCTGCCGC TCGGGGATCG AGGCTCTGGC CGAACTGTCG
GCGGATGCGG GCTATGACCT CCTTCTGACC GATCACGAGA TGCCCGACCT CGACGGGCTT
GCGCTGGCCC AAAGGGTGCG TGCGGGCGGC TTCTCCATGC CGATCCTTCT TCTGACCTCG
AACCCGTCCG CCGTGCGCGA TCATCCGGCC GAGGCGCTGC TGGCCGGAGT GCTGCAGAAG
CCGCTCCTGC GCTCTGATCT CTACCGGCGC CTCCAGTCTT TGACCGCGCC CCCCGCCGCG
CCGGACCGGC CGCCGCCCGT GCCGGTGCCG GCGCTCCGGC GGATGCGGGT GCTGGCCGCC
GAGGACAACC GCACCAACCA GCTCGTCTTC GGCAAGATGG TGCGAGACCT CGACATCGAC
CTCACCTTCG CCGACAACGG CCGCGAGGCG GTGGAGCTTT ATGATCGCAT CCGGCCCGAT
CTCGTCTTCA TGGATATCTC GATGCCGGAA ATGGATGGGC GTGCGGCCGC GCGCGCCATC
CGCGCCCGTG AGCGTGGGGG CACCCATGTG CCCATCGTGG CACTGACGGC CCACGCGCTC
GAGAGCGACG CCCGGGCCAG TGCCGCCGCA GGTATCGACC GGACGCTCAC CAAGCCCCTG
CGCCGGGCCA TGATCCTCGA AACGCTGGCG GCCTTCTGTC CGGCAGGCAC CCGGCCCATC
CAGCCCGCCT TGGTCGAGGG GCCGGACTGA
 
Protein sequence
MDIEQKLAKE RRARLAAERL LEYKQRELFA ANEKLAIHAR ALSDQIIEQR AVVKTALSEA 
EKLKGQNSRF LSELERAHTA AVMAERRLWD SIDAIEDGFA VFDAGQRLVA ANEAYRCHFE
GLEVRPGMAL ADLLQLATTH GLIDLRGEPA DHWRQRMIRR WDEDPVEPEI VRRCTGQWLR
LVNRRARDGD MVSLLIDITE QMRLRAAIDA IPDGFVLFDR AERLVLCNDR YRAIYPRSAE
ALRPGAPFEE ILRHGLAHGQ FPEAAGREEE WLADRLAAFR HLGGAAEQQL DDGRWLRVIE
HETPDGGRVG LGVDITELKR QQAALESARA AAEAASRAKS AFLANMSHEI RTPMNGIVGM
ADLLCETVLT EDQRLFSETI RSSGEALLVI INDILDYSKI EANRLTLHPE PFDLERTIHE
VAMLLQPKAR AKGIDLLIDF DLFLPTRFVG DPGRLRQVLT NLIGNAVKFT AAGHVLIRVV
GLEVAPGRHD LRVTVEDTGI GIAPEHLDHV FGEFNQIEAE ATRRFEGTGL GLAITRRLIE
LMQGAVWVES EPGRGSCFGF RLTLPAADDE AAPPVPIEVR RALVVDGQFI NRTILERQLA
PCGISVTLCR SGIEALAELS ADAGYDLLLT DHEMPDLDGL ALAQRVRAGG FSMPILLLTS
NPSAVRDHPA EALLAGVLQK PLLRSDLYRR LQSLTAPPAA PDRPPPVPVP ALRRMRVLAA
EDNRTNQLVF GKMVRDLDID LTFADNGREA VELYDRIRPD LVFMDISMPE MDGRAAARAI
RARERGGTHV PIVALTAHAL ESDARASAAA GIDRTLTKPL RRAMILETLA AFCPAGTRPI
QPALVEGPD